RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 GPR137Q96N19 417 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 DLL3Q9NYJ7 618 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 NSG2Q9Y328 171 aa13.59□□□□□ -0.23
SMARCD1-202ENST00000394963 IRF2P14316 349 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 CTSSP25774 331 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 NKX2-1P43699 371 aaPredicted RBP13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 PRR30Q53SZ7 412 aaPredicted RBP13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 RTBDNQ9BSG5 229 aaPredicted RBP13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 PTPN13Q12923 2485 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 LEUTXA8MZ59 168 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 KCNRGQ8N5I3 272 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 TCTEX1D2Q8WW35 142 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 TMEM230Q96A57 120 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 F8W036 122 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 TERTO14746 1132 aaKnown RBP13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 OR2H2O95918 312 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 CD82P27701 267 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 ALDH3B1P43353 468 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 KIR2DL2P43627 348 aaPredicted RBP13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 BLOC1S1P78537 153 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 Q6ZT83 130 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 TMEM45BQ96B21 275 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 RNF122Q9H9V4 155 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 EDARQ9UNE0 448 aa13.58□□□□□ -0.24
SMARCD1-202ENST00000394963 TNRC6AQ8NDV7 1962 aaKnown RBP13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 C3orf85A0A1B0GTC6 90 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 NKX2-6A6NCS4 301 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 ST8SIA3O43173 380 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 MELTFP08582 738 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 ID4P47928 161 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 C1QTNF12Q5T7M4 302 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 SLC35G3Q8N808 338 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 GTF3AQ92664 365 aaKnown RBP13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 NAA60Q9H7X0 242 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 TAAR3PQ9P1P4 343 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 FAM96BQ9Y3D0 163 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 MPC1Q9Y5U8 109 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 TRAV14DV4A0A0A6YYC5 116 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 PPP1CCP36873 323 aaKnown RBP13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 FGF12P61328 243 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 PRB3Q04118 309 aaPredicted RBP13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 SPANXN5Q5MJ07 72 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 FAM213BQ8TBF2 198 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 RCL1Q9Y2P8 373 aaKnown RBP13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 MALRD1Q5VYJ5 2156 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 SOX15O60248 233 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 C1QL1O75973 258 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 VAX1Q5SQQ9 334 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 BAP18Q8IXM2 172 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 OR52M1Q8NGK5 317 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 SPACA1Q9HBV2 294 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 PSG11Q9UQ72 335 aa13.57□□□□□ -0.24
SMARCD1-202ENST00000394963 IGKV3D-15A0A087WSY6 115 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 M0R036 132 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 SMPD2O60906 423 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 GNG10P50151 68 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 PPT1P50897 306 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 NHLH2Q02577 135 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 LPCAT3Q6P1A2 487 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 C10orf35Q96D05 121 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 C20orf24Q9BUV8 137 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 BORCS7-ASMTA0A0B4J1R7 106 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 TM4SF5O14894 197 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 OR2A4O95047 310 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 OPN1MWP04001 364 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 OPN1MW2P0DN77 364 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 OPN1MW3P0DN78 364 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 AKR1C3P42330 323 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 ACSF3Q4G176 576 aaPredicted RBP13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 FAM76BQ5HYJ3 339 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 ZNF660Q6AZW8 331 aaPredicted RBP13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 ZNRF1Q8ND25 227 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 ABHD14BQ96IU4 210 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 OR2A7Q96R45 310 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 LINC00470Q9BZP3 86 aa13.56□□□□□ -0.24
SMARCD1-202ENST00000394963 OR5B21A6NL26 309 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 CRYZL1O95825 349 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 CLDN1O95832 211 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 HAND1O96004 215 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 CRYABP02511 175 aaKnown RBP13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 HEXAP06865 529 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 UBA52P62987 128 aaKnown RBP13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 GABRA6Q16445 453 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 AANATQ16613 207 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 LILRB2Q8N423 598 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 OR52L2PQ8NGH6 319 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 OR1S2Q8NGQ3 325 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 TP53RKQ96S44 253 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 LIME1Q9H400 295 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 RPL36A-HNRNPH2H7BZ11 118 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 J3QT63 122 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 IFNA17P01571 189 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 TMEM33P57088 247 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 OR2F1Q13607 317 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 KRBOX4Q5JUW0 171 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 EIF5AL1Q6IS14 154 aaKnown RBP13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 TMEM88Q6PEY1 159 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 TMEM182Q6ZP80 229 aaPredicted RBP13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 GFOD1Q9NXC2 390 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 RASL12Q9NYN1 266 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms