RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 VAX1Q5SQQ9 334 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 ZNF600Q6ZNG1 722 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 SPACA9Q96E40 222 aaPredicted RBP11.47□□□□□ -0.57
NFKB1-202ENST00000394820 IL36RNQ9UBH0 155 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 BDP1A6H8Y1 2624 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 DEFB108AA8MXU0 73 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 CRYAAP02489 173 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 RPS23P62266 143 aaKnown RBP11.47□□□□□ -0.57
NFKB1-202ENST00000394820 FAM166AQ6J272 317 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 NINJ1Q92982 152 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 IL22RA2Q969J5 263 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 MARS2Q96GW9 593 aaKnown RBP11.47□□□□□ -0.57
NFKB1-202ENST00000394820 INTS1Q8N201 2190 aaKnown RBP11.46□□□□□ -0.57
NFKB1-202ENST00000394820 FTCDNL1E5RQL4 147 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 LAMTOR5O43504 91 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 EDDM3AQ14507 147 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 ZNF385CQ66K41 422 aaPredicted RBP11.46□□□□□ -0.57
NFKB1-202ENST00000394820 OR10AD1Q8NGE0 317 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 MALSU1Q96EH3 234 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 PLEKHF2Q9H8W4 249 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 SERTAD4Q9NUC0 356 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 MPPED1O15442 326 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 IFNA1P01562 189 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 FCGR3AP08637 254 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 OR8U8P0C7N1 319 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 P2RY1P47900 373 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 C3AR1Q16581 482 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 TMEM252Q8N6L7 170 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 OR10J5Q8NHC4 309 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 DNASE2BQ8WZ79 361 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 SAMD10Q9BYL1 202 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 MOB1AQ9H8S9 216 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 PSENENQ9NZ42 101 aa11.46□□□□□ -0.57
NFKB1-202ENST00000394820 STRAPQ9Y3F4 350 aaKnown RBP11.46□□□□□ -0.57
NFKB1-202ENST00000394820 ABCA4P78363 2273 aa11.46□□□□□ -0.58
NFKB1-202ENST00000394820 XKRY2A2RUG3 117 aa11.46□□□□□ -0.58
NFKB1-202ENST00000394820 TRGC1P0CF51 173 aa11.46□□□□□ -0.58
NFKB1-202ENST00000394820 FUT3P21217 361 aa11.46□□□□□ -0.58
NFKB1-202ENST00000394820 HLA-DRB3P79483 266 aa11.46□□□□□ -0.58
NFKB1-202ENST00000394820 LFNGQ8NES3 379 aa11.46□□□□□ -0.58
NFKB1-202ENST00000394820 ABHD3Q8WU67 409 aa11.46□□□□□ -0.58
NFKB1-202ENST00000394820 PP6455Q8WZ26 134 aa11.46□□□□□ -0.58
NFKB1-202ENST00000394820 NOSIPQ9Y314 301 aaKnown RBP11.46□□□□□ -0.58
NFKB1-202ENST00000394820 ACACAQ13085 2346 aa11.46□□□□□ -0.58
NFKB1-202ENST00000394820 TRAV34A0A0B4J273 112 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 ISG15P05161 165 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 RTP5Q14D33 572 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 PLPPR5Q32ZL2 321 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 TMEM41BQ5BJD5 291 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 NCR3LG1Q68D85 454 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 FDX2Q6P4F2 183 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 PQLC2LA1A4F0 135 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 IL2RGP31785 369 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 CASP6P55212 293 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 BTNL8Q6UX41 500 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 KMT5CQ86Y97 462 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 ZNF441Q8N8Z8 693 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 NFAM1Q8NET5 270 aaPredicted RBP11.45□□□□□ -0.58
NFKB1-202ENST00000394820 Q8WTZ3 238 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 SMIM8Q96KF7 97 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 FUT9Q9Y231 359 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 A0A1W2PPV4 95 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 ZNF320A2RRD8 509 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 K7ESF4 209 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 TRAF3IP2O43734 574 aaPredicted RBP11.45□□□□□ -0.58
NFKB1-202ENST00000394820 CXCL1P09341 107 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 PGA3P0DJD8 388 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 SELEP16581 610 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 THBS4P35443 961 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 FAM3BP58499 235 aaPredicted RBP11.45□□□□□ -0.58
NFKB1-202ENST00000394820 OR13D1Q8NGV5 346 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 OR1F12Q8NHA8 337 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 CPT1CQ8TCG5 803 aa11.45□□□□□ -0.58
NFKB1-202ENST00000394820 IGHV3-43A0A0B4J1X8 118 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 IGHV3-43DP0DP04 118 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 SSR4P51571 173 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 STARD6P59095 220 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 ZNF92Q03936 586 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 PYY3Q5JQD4 70 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 PHYHD1Q5SRE7 291 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 AGBL5Q8NDL9 886 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 POC1BQ8TC44 478 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 CDX2Q99626 313 aaPredicted RBP11.44□□□□□ -0.58
NFKB1-202ENST00000394820 V9GYS6 101 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 NOTCH3Q9UM47 2321 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 IGSF23A1L1A6 192 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 C5orf52A6NGY3 159 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 HBE1P02100 147 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 RAB1AP62820 205 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 ADGRG7Q96K78 797 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 PISDQ9UG56 409 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 OR5H1A6NKK0 313 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 F8VVB4 439 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 F8VWA3 439 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 CLDN34H7C241 214 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 DANCRP0C864 163 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 PLA2G5P39877 138 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 CLDN15P56746 228 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 FAM3AP98173 230 aa11.44□□□□□ -0.58
NFKB1-202ENST00000394820 ZNF468Q5VIY5 522 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms