RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SLC22A20A6NK97 555 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 PROB1E7EW31 1015 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 CYTIPO60759 359 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 SERPINE2P07093 398 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 GLI4P10075 376 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 OMGP23515 440 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 CXCL12P48061 93 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 NPBWR2P48146 333 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 B3GALT5-AS1P59052 145 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 HBG1P69891 147 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 HBG2P69892 147 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 RNPS1Q15287 305 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 ELOBQ15370 118 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 HAGHQ16775 308 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 CEACAM21Q3KPI0 293 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 IGSF11Q5DX21 431 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 BRICD5Q6PL45 260 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 ZNF818PQ6ZRF7 136 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 COLCA1Q6ZS62 124 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 MRPL21Q7Z2W9 205 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 GAPTQ8N292 157 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 SUMF1Q8NBK3 374 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 RNASE11Q8TAA1 199 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 SAP25Q8TEE9 199 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 PINX1Q96BK5 328 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 ALKBH3Q96Q83 286 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 PFDN5Q99471 154 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 CTDSP1Q9GZU7 261 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 TREM2Q9NZC2 230 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 HS3ST3B1Q9Y662 390 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 TNRC6BQ9UPQ9 1833 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 LOC102723971A0A1B0GUV8 181 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 A0A1B0GV50 99 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 ZNF729A6NN14 1252 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 CDRT15L2A8MXV6 281 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 PPP1R2P9O14990 202 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 DEGS1O15121 323 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 CHST1O43916 411 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 NDUFS6O75380 124 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 UMODP07911 640 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 F2RP25116 425 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 CD200P41217 278 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 NOVA1P51513 510 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 SERF2P84101 59 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 PRDX4Q13162 271 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 TGIF1Q15583 401 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 SP5Q6BEB4 398 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 MOB1BQ7L9L4 216 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 LINC00469Q8N7U9 141 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 LSM10Q969L4 123 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 APOBEC3DQ96AK3 386 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 SIGLEC12Q96PQ1 595 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 PARD6GQ9BYG4 376 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 OCIAD1Q9NX40 245 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 GON4LQ3T8J9 2241 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 ASXL3Q9C0F0 2248 aa8.63□□□□□ -1.03
UBE2D3-208ENST00000394803 LY6G6EA0A0G2JKS1 128 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 CLDN34H7C241 214 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 CXCL13O43927 109 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 ZNF205O95201 554 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 MMP7P09237 267 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 CEBPGP53567 150 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 NDUFA6P56556 154 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 TRIM61Q5EBN2 209 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 CXorf66Q5JRM2 361 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 NCMAPQ5T1S8 102 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 GGNQ86UU5 652 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 CALHM1Q8IU99 346 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 CYB561D1Q8N8Q1 229 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 NAXEQ8NCW5 288 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 OR5A2Q8NGI9 324 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 OR10D3Q8NH80 312 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 OR10J5Q8NHC4 309 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 TMEM171Q8WVE6 324 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 PSMF1Q92530 271 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 IER2Q9BTL4 223 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 GLRX2Q9NS18 164 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 P4HTMQ9NXG6 502 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 ZNF581Q9P0T4 197 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 U3KQA8 63 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 MRPL33O75394 65 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 CST7O76096 145 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 CYB5R3P00387 301 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 OPN1MWP04001 364 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 OPN1MW2P0DN77 364 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 OPN1MW3P0DN78 364 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 EDN3P14138 238 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 BCL3P20749 454 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 MDH2P40926 338 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 RPS18P62269 152 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 PMS2P11Q13670 270 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 TMEM217Q8N7C4 229 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 IFI44Q8TCB0 444 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 Q8WTZ3 238 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 MBD3L1Q8WWY6 194 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 ADGRG7Q96K78 797 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 REPIN1Q9BWE0 567 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 MAGT1Q9H0U3 335 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 GFOD1Q9NXC2 390 aa8.62□□□□□ -1.03
UBE2D3-208ENST00000394803 DOK5Q9P104 306 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms