RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 PIGMQ9H3S5 423 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 PLEKHA2Q9HB19 425 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 ZFP57Q9NU63 452 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 FBXO9Q9UK97 447 aaPredicted RBP7.68□□□□□ -1.18
TDP1-202ENST00000393452 AMDHD2Q9Y303 409 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 ZNF292O60281 2723 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 C1QTNF9BB2RNN3 333 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 B8ZZF3 427 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 E5RGE8 158 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 NPIPB11E5RHQ5 1161 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 DEGS1O15121 323 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 IGLV1-44P01699 117 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 RCC1P18754 421 aaPredicted RBP7.68□□□□□ -1.18
TDP1-202ENST00000393452 TUBG1P23258 451 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 MPV17P39210 176 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 MDH2P40926 338 aaKnown RBP7.68□□□□□ -1.18
TDP1-202ENST00000393452 NOVA1P51513 510 aaKnown RBP7.68□□□□□ -1.18
TDP1-202ENST00000393452 EIF5AP63241 154 aaKnown RBP7.68□□□□□ -1.18
TDP1-202ENST00000393452 HLA-DRB3P79483 266 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 ZNF146Q15072 292 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 TMEM268Q5VZI3 342 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 TBC1D26Q86UD7 250 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 SLC35G3Q8N808 338 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 OR52M1Q8NGK5 317 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 OR1S2Q8NGQ3 325 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 SECTM1Q8WVN6 248 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 TUBG2Q9NRH3 451 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 TAS2R3Q9NYW6 316 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 NSG2Q9Y328 171 aa7.68□□□□□ -1.18
TDP1-202ENST00000393452 RAB19A4D1S5 217 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 MBD3L4A6NDZ8 208 aaPredicted RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 MBD3L3A6NE82 208 aaPredicted RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 MBD3L5A6NJ08 208 aaPredicted RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 TMEM210A6NLX4 147 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 CDIPTO14735 213 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 WDR1O75083 606 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 CDS2O95674 445 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 HOXC12P31275 282 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 EIF2S3P41091 472 aaKnown RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 NBL1P41271 181 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 ZNF324BQ6AW86 544 aaPredicted RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 RPL7L1Q6DKI1 246 aaKnown RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 UQCC3Q6UW78 93 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 SEM1Q6ZVN7 128 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 H1FOOQ8IZA3 346 aaPredicted RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 ZNF565Q8N9K5 539 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 OR4D5Q8NGN0 318 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 MBD3L2Q8NHZ7 208 aaPredicted RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 MARC2Q969Z3 335 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 STARD4Q96DR4 205 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 HES4Q9HCC6 221 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 OBP2BQ9NPH6 170 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 ZNF71Q9NQZ8 489 aaPredicted RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 LSM5Q9Y4Y9 91 aaKnown RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 ZFHX2Q9C0A1 2572 aaPredicted RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 SLC33A1O00400 549 aaPredicted RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 JTBO76095 146 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 OR2H2O95918 312 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 HOXD4P09016 255 aaPredicted RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 WNT2P09544 360 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 ZNF44P15621 663 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 UCP1P25874 307 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 TMEM33P57088 247 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 P2RY6Q15077 328 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 KIAA2026Q5HYC2 2103 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 SPIN3Q5JUX0 258 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 ZNF497Q6ZNH5 498 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 Q6ZS92 163 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 MOB1BQ7L9L4 216 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 STPG2Q8N412 459 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 FAM169BQ8N8A8 192 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 ZNF610Q8N9Z0 462 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 SPERTQ8NA61 448 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 GALNT11Q8NCW6 608 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 OR8G5Q8NG78 346 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 TAF9BQ9HBM6 251 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 CCL28Q9NRJ3 127 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 FBXL17Q9UF56 701 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 OR2W1Q9Y3N9 320 aa7.67□□□□□ -1.18
TDP1-202ENST00000393452 PRRC2CQ9Y520 2896 aaKnown RBP7.67□□□□□ -1.18
TDP1-202ENST00000393452 DUXBA0A1W2PPF3 345 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 CLEC18AA5D8T8 446 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 H0YL77 283 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 ST8SIA3O43173 380 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 MLNRO43193 412 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 AGFG2O95081 481 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 SCGB1D2O95969 90 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 CECR9P0C854 216 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 KITLGP21583 273 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 P2RY1P47900 373 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 OR8G1Q15617 311 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 GPR157Q5UAW9 335 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 EIF5AL1Q6IS14 154 aaKnown RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 MEX3BQ6ZN04 569 aaKnown RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 CXorf67Q86X51 503 aaPredicted RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 SELENOHQ8IZQ5 122 aaKnown RBP7.66□□□□□ -1.18
TDP1-202ENST00000393452 CLEC18CQ8NCF0 446 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 DMBX1Q8NFW5 382 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 OR10J5Q8NHC4 309 aa7.66□□□□□ -1.18
TDP1-202ENST00000393452 PLPPR1Q8TBJ4 325 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms