RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 C9orf170A2RU37 121 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 DPRXA6NFQ7 191 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 KITLGP21583 273 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 ERVK11-1P61568 191 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 NKX6-1P78426 367 aaPredicted RBP12.65□□□□□ -0.38
MKS1-202ENST00000393119 KLRB1Q12918 225 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 LY6G6FQ5SQ64 297 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 FAM201AQ5SY85 155 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 TMEM17Q86X19 198 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 BOLLQ8N9W6 283 aaKnown RBP12.65□□□□□ -0.38
MKS1-202ENST00000393119 BPIFCQ8NFQ6 507 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 WFIKKN1Q96NZ8 548 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 MRPL37Q9BZE1 423 aaKnown RBP12.65□□□□□ -0.38
MKS1-202ENST00000393119 PKIBQ9C010 78 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 FXYD6Q9H0Q3 95 aa12.65□□□□□ -0.38
MKS1-202ENST00000393119 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
MKS1-202ENST00000393119 NKX2-6A6NCS4 301 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 F8W036 122 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 OR2H2O95918 312 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 PGA5P0DJD9 388 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 TAS2R46P59540 309 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 UBA52P62987 128 aaKnown RBP12.64□□□□□ -0.39
MKS1-202ENST00000393119 SUPT4H1P63272 117 aaKnown RBP12.64□□□□□ -0.39
MKS1-202ENST00000393119 IL13RA1P78552 427 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 MBNL2Q5VZF2 373 aaKnown RBP12.64□□□□□ -0.39
MKS1-202ENST00000393119 FAM53AQ6NSI3 398 aaPredicted RBP12.64□□□□□ -0.39
MKS1-202ENST00000393119 C12orf45Q8N5I9 185 aaPredicted RBP12.64□□□□□ -0.39
MKS1-202ENST00000393119 PLPPR1Q8TBJ4 325 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 RND1Q92730 232 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 NEUROG1Q92886 237 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 NRIP2Q9BQI9 281 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 JKAMPQ9P055 326 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 RCC2Q9P258 522 aaKnown RBP12.64□□□□□ -0.39
MKS1-202ENST00000393119 MEMO1Q9Y316 297 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 RFPL4AA6NLU0 287 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 FAM90A27PA6NNH2 459 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 RFPL4AL1F8VTS6 287 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 DEGS1O15121 323 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 CA11O75493 328 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 TBPP20226 339 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 ATXN7L3Q14CW9 347 aaPredicted RBP12.64□□□□□ -0.39
MKS1-202ENST00000393119 HERPUD1Q15011 391 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 C11orf88Q6PI97 169 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 ARRDC1Q8N5I2 433 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 LINC00469Q8N7U9 141 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 ALX4Q9H161 411 aaPredicted RBP12.64□□□□□ -0.39
MKS1-202ENST00000393119 DCHS2Q6V1P9 2916 aa12.64□□□□□ -0.39
MKS1-202ENST00000393119 IGKV1-6A0A0C4DH72 117 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 PSPNO60542 156 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 ATG12O94817 140 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 SPDEFO95238 335 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 PTBP3O95758 552 aaKnown RBP12.63□□□□□ -0.39
MKS1-202ENST00000393119 PGAM2P15259 253 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 EGR1P18146 543 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 FCGR2CP31995 323 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 BSPH1Q075Z2 132 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 ADAM5Q6NVV9 412 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 PCSK4Q6UW60 755 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 PRR18Q8N4B5 295 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 DMBX1Q8NFW5 382 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 MFFQ9GZY8 342 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 C1orf123Q9NWV4 160 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 FAM25EA8MYX2 175 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 CD34P28906 385 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 UQCC3Q6UW78 93 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 LYG2Q86SG7 212 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 TPRX1Q8N7U7 411 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 FAM169BQ8N8A8 192 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 ZDHHC22Q8N966 263 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 OR11L1Q8NGX0 322 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 MRPL30Q8TCC3 161 aaKnown RBP12.63□□□□□ -0.39
MKS1-202ENST00000393119 CXXC4Q9H2H0 198 aa12.63□□□□□ -0.39
MKS1-202ENST00000393119 PKDREJQ9NTG1 2253 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 CHD3Q12873 2000 aaKnown RBP12.62□□□□□ -0.39
MKS1-202ENST00000393119 IGHV3OR15-7A0A075B7D8 119 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 A0A1B0GW55 424 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 H7C2Y5 167 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 SLC33A1O00400 549 aaPredicted RBP12.62□□□□□ -0.39
MKS1-202ENST00000393119 CCL21O00585 134 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 KCNAB3O43448 404 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 ADAP1O75689 374 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 NAPSAO96009 420 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 DUX4L2P0CJ85 424 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 DUX4L3P0CJ86 424 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 DUX4L4P0CJ87 422 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 DUX4L5P0CJ88 424 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 DUX4L6P0CJ89 424 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 DUX4L7P0CJ90 424 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 DTYMKP23919 212 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 PMELP40967 661 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 DEFA5Q01523 94 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 SRSF4Q08170 494 aaKnown RBP12.62□□□□□ -0.39
MKS1-202ENST00000393119 ARL6IP1Q15041 203 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 ANKRD55Q3KP44 614 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 CLEC18BQ6UXF7 455 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 LINC01560Q8TB33 94 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 PIGMQ9H3S5 423 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 Q9N2K0 584 aa12.62□□□□□ -0.39
MKS1-202ENST00000393119 DCAF16Q9NXF7 216 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms