RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ZNF716A6NP11 495 aa14.24□□□□□ -0.13
SHANK1-204ENST00000391814 NKX2-2O95096 273 aa14.24□□□□□ -0.13
SHANK1-204ENST00000391814 ZNF707Q96C28 371 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-204ENST00000391814 FOXQ1Q9C009 403 aa14.24□□□□□ -0.13
SHANK1-204ENST00000391814 TAF1P21675 1872 aa14.24□□□□□ -0.13
SHANK1-204ENST00000391814 A0A0B4J293 547 aa14.24□□□□□ -0.13
SHANK1-204ENST00000391814 DSCR4P56555 118 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-204ENST00000391814 OR2V1Q8NHB1 315 aa14.24□□□□□ -0.13
SHANK1-204ENST00000391814 HDHD3Q9BSH5 251 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-204ENST00000391814 SUMO3P55854 103 aaPredicted RBP14.23□□□□□ -0.13
SHANK1-204ENST00000391814 EIF3IQ13347 325 aaKnown RBP14.23□□□□□ -0.13
SHANK1-204ENST00000391814 Q8IYB0 196 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 MRPL13Q9BYD1 178 aaKnown RBP14.23□□□□□ -0.13
SHANK1-204ENST00000391814 PROCRQ9UNN8 238 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 COL8A1P27658 744 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 WNT5AP41221 380 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 ANKRD55Q3KP44 614 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 Q5BKY6 102 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 SLC25A30Q5SVS4 291 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 OR11G2Q8NGC1 345 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 C1QCP02747 245 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 HOXB3P14651 431 aaPredicted RBP14.23□□□□□ -0.13
SHANK1-204ENST00000391814 DOLPP1Q86YN1 238 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 PHOSPHO2Q8TCD6 241 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 MRGPRFQ96AM1 343 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 C1QL1O75973 258 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 C6orf15Q6UXA7 325 aaPredicted RBP14.23□□□□□ -0.13
SHANK1-204ENST00000391814 TMEM208Q9BTX3 173 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 SH3BGRL3Q9H299 93 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 CTXND1A0A1B0GTU2 59 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 HIST1H1EP10412 219 aaKnown RBP14.23□□□□□ -0.13
SHANK1-204ENST00000391814 MRPL58Q14197 206 aaKnown RBP14.23□□□□□ -0.13
SHANK1-204ENST00000391814 COL19A1Q14993 1142 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 PABPC1L2AQ5JQF8 200 aa14.23□□□□□ -0.13
SHANK1-204ENST00000391814 CEACAM5P06731 702 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 ZNF260Q3ZCT1 412 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 PTCRAQ6ISU1 281 aaPredicted RBP14.22□□□□□ -0.13
SHANK1-204ENST00000391814 H1FOOQ8IZA3 346 aaPredicted RBP14.22□□□□□ -0.13
SHANK1-204ENST00000391814 LRRC3BQ96PB8 259 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 MRPS18BQ9Y676 258 aaKnown RBP14.22□□□□□ -0.13
SHANK1-204ENST00000391814 LOC107984156A0A0G2JMH3 177 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 SLC22A20A6NK97 555 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 MYOGP15173 224 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 GFERP55789 205 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 PIGYQ3MUY2 71 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 HES3Q5TGS1 186 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 PRSS41Q7RTY9 318 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 ARL17AQ8IVW1 177 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 F11RQ9Y624 299 aaKnown RBP14.22□□□□□ -0.13
SHANK1-204ENST00000391814 COL22A1Q8NFW1 1626 aaPredicted RBP14.22□□□□□ -0.13
SHANK1-204ENST00000391814 ZNF141Q15928 474 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 Q6ZNB5 142 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 OR4C3Q8NH37 302 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 CLN8Q9UBY8 286 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 PPYP01298 95 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 MGPP08493 103 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 OR8I2Q8N0Y5 310 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 OR1N1Q8NGS0 311 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 CT62P0C5K7 136 aa14.22□□□□□ -0.13
SHANK1-204ENST00000391814 K7ESF4 209 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 AREGP15514 252 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 HFEQ30201 348 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 ASB5Q8WWX0 329 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 CAPZBP47756 277 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 OR8B3Q8NGG8 313 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 UBE2ZQ9H832 354 aaPredicted RBP14.21□□□□□ -0.13
SHANK1-204ENST00000391814 BCORQ6W2J9 1755 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 RNASE1P07998 156 aaKnown RBP14.21□□□□□ -0.13
SHANK1-204ENST00000391814 SCGB1A1P11684 91 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 GLULP15104 373 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 HIST1H1BP16401 226 aaKnown RBP14.21□□□□□ -0.13
SHANK1-204ENST00000391814 C12orf54Q6X4T0 127 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 EID2BQ96D98 161 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 FLRT3Q9NZU0 649 aa14.21□□□□□ -0.13
SHANK1-204ENST00000391814 B4E171 279 aa14.21□□□□□ -0.14
SHANK1-204ENST00000391814 AMY1AP04745 511 aa14.21□□□□□ -0.14
SHANK1-204ENST00000391814 C10orf113Q5VZT2 155 aa14.21□□□□□ -0.14
SHANK1-204ENST00000391814 TMEM136Q6ZRR5 245 aa14.21□□□□□ -0.14
SHANK1-204ENST00000391814 OR10S1Q8NGN2 331 aa14.21□□□□□ -0.14
SHANK1-204ENST00000391814 HSPB1P04792 205 aaKnown RBP14.2□□□□□ -0.14
SHANK1-204ENST00000391814 PATE4P0C8F1 98 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 ZNF32P17041 273 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 GZMMP51124 257 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 METAP1P53582 386 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 OR13G1Q8NGZ3 307 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 TBX21Q9UL17 535 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 NDUFB4O95168 129 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 EMP1P54849 157 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 SLC52A3Q9NQ40 469 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 ZDHHC8Q9ULC8 765 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 NPIPB9F8W1W9 429 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 M0R3E3 92 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 ORM1P02763 201 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 DEGS2Q6QHC5 323 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 PARM1Q6UWI2 310 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 PRNTQ86SH4 94 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 OPN3Q9H1Y3 402 aaPredicted RBP14.2□□□□□ -0.14
SHANK1-204ENST00000391814 ZNF256Q9Y2P7 627 aaPredicted RBP14.2□□□□□ -0.14
SHANK1-204ENST00000391814 KLHDC2Q9Y2U9 406 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 OR2W1Q9Y3N9 320 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms