RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 KIAA1143Q96AT1 154 aaPredicted RBP1.59□□□□□ -2.15
SNORA40.4-201ENST00000390971 CAPZA3Q96KX2 299 aa1.59□□□□□ -2.15
SNORA40.4-201ENST00000390971 APOL4Q9BPW4 351 aa1.59□□□□□ -2.15
SNORA40.4-201ENST00000390971 FBXO44Q9H4M3 255 aa1.59□□□□□ -2.15
SNORA40.4-201ENST00000390971 COL4A1P02462 1669 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 LCTP09848 1927 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 OTOFQ9HC10 1997 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 LOC102725191A0A1B0GVB3 256 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 A8MWP6 167 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 F8VP50 259 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 MBP02144 154 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 TTPAP49638 278 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 PLTPP55058 493 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 RAB38P57729 211 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 STX4Q12846 297 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 SPPL2BQ8TCT7 592 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 DCANP1Q8TF63 244 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 BIRC8Q96P09 236 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 POMPQ9Y244 141 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 AK9Q5TCS8 1911 aa1.58□□□□□ -2.16
SNORA40.4-201ENST00000390971 FLG2Q5D862 2391 aaPredicted RBP1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 IGHV3OR15-7A0A075B7D8 119 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 SIGLEC16A6NMB1 481 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 HMMRO75330 724 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 CA2P00918 260 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 TPM2P07951 284 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 MAGEA3P43357 314 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 HES1Q14469 280 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 GUSBP1Q15486 140 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 ZIC4Q8N9L1 334 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 OR6K2Q8NGY2 324 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 CD200R1Q8TD46 325 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 CLDN23Q96B33 292 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 ZNF625Q96I27 306 aaPredicted RBP1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 ZNF396Q96N95 335 aaPredicted RBP1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 PITX2Q99697 317 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 ALX4Q9H161 411 aaPredicted RBP1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 ANKHQ9HCJ1 492 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 VCX3AQ9NNX9 186 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 FAM206AQ9NX38 181 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 BTRCQ9Y297 605 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 COL18A1P39060 1754 aa1.57□□□□□ -2.16
SNORA40.4-201ENST00000390971 A0A0J9YX75 114 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 SNAI1O95863 264 aaPredicted RBP1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 ZNF7P17097 686 aaPredicted RBP1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 CPN2P22792 545 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 CBX5P45973 191 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 OR8G1Q15617 311 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 SSX7Q7RTT5 188 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 SLC25A45Q8N413 288 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 PDCD6IPQ8WUM4 868 aaKnown RBP1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 SUCNR1Q9BXA5 334 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 MAP1LC3CQ9BXW4 147 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 SYT4Q9H2B2 425 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 GAL3ST2Q9H3Q3 398 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 NCOR1P1Q9H4R4 102 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 FBXL3Q9UKT7 428 aa1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 TRPM3Q9HCF6 1732 aaPredicted RBP1.56□□□□□ -2.16
SNORA40.4-201ENST00000390971 IGSF23A1L1A6 192 aa1.55□□□□□ -2.16
SNORA40.4-201ENST00000390971 PDCD6O75340 191 aa1.55□□□□□ -2.16
SNORA40.4-201ENST00000390971 RHOAP61586 193 aa1.55□□□□□ -2.16
SNORA40.4-201ENST00000390971 GTF2H4Q92759 462 aa1.55□□□□□ -2.16
SNORA40.4-201ENST00000390971 CHTOPQ9Y3Y2 248 aaKnown RBP1.55□□□□□ -2.16
SNORA40.4-201ENST00000390971 GOLGA6L7A0A1B0GV03 622 aa1.54□□□□□ -2.16
SNORA40.4-201ENST00000390971 TMEM250H0YL14 139 aa1.54□□□□□ -2.16
SNORA40.4-201ENST00000390971 ANGP03950 147 aaKnown RBP1.54□□□□□ -2.16
SNORA40.4-201ENST00000390971 ZNF3P17036 446 aa1.54□□□□□ -2.16
SNORA40.4-201ENST00000390971 CLEC20AQ6ZU45 233 aa1.54□□□□□ -2.16
SNORA40.4-201ENST00000390971 FAM19A1Q7Z5A9 133 aa1.54□□□□□ -2.16
SNORA40.4-201ENST00000390971 CDKL2Q92772 493 aa1.54□□□□□ -2.16
SNORA40.4-201ENST00000390971 HEY1Q9Y5J3 304 aa1.54□□□□□ -2.16
SNORA40.4-201ENST00000390971 MPDZO75970 2070 aa1.54□□□□□ -2.16
SNORA40.4-201ENST00000390971 I3L4J1 428 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 RFXANKO14593 260 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 DENRO43583 198 aaKnown RBP1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 ENSAO43768 121 aaKnown RBP1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 IGKV5-2P06315 115 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 CR1P17927 2039 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 GTF2H1P32780 548 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 HBG1P69891 147 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 HBG2P69892 147 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 TSPAN31Q12999 210 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 STK38Q15208 465 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 OLIG3Q7RTU3 272 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 FAM184AQ8NB25 1140 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 OR8G5Q8NG78 346 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 COPS4Q9BT78 406 aa1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 DDX18Q9NVP1 670 aaKnown RBP1.53□□□□□ -2.16
SNORA40.4-201ENST00000390971 RP1L1Q8IWN7 2480 aaPredicted RBP1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 MUC21A0A0G2JKD1 596 aa1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 MUC21A0A140T8X8 626 aa1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 FAM183AA6NL82 134 aa1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 KDELR3O43731 214 aa1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 PYCR1P32322 319 aa1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 INPP1P49441 399 aa1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 HTR4Q13639 388 aa1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 SDIM1Q6ZPB5 146 aa1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 SPICQ8N5J4 248 aa1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 GATD1Q8NB37 220 aa1.52□□□□□ -2.17
SNORA40.4-201ENST00000390971 OR4A15Q8NGL6 344 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms