RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 NABP1Q96AH0 204 aa15.27■□□□□ 0.04
SQSTM1-202ENST00000389805 A0A1B0GWJ7 208 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 ZFP92A6NM28 416 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 SERPINE3A8MV23 424 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 ANGPTL7O43827 346 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 SSSCA1O60232 199 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 PATE4P0C8F1 98 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 EPHA1P21709 976 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 TUBG1P23258 451 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 HOXA6P31267 233 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 TLE1Q04724 770 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 IL13RA2Q14627 380 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 DOK3Q7L591 496 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 SLC35G3Q8N808 338 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 GPHA2Q96T91 129 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 SLC2A9Q9NRM0 540 aa15.27■□□□□ 0.03
SQSTM1-202ENST00000389805 TNRC6BQ9UPQ9 1833 aaKnown RBP15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 FOXI3A8MTJ6 420 aaPredicted RBP15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 IL18BPO95998 194 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 RFPL3SP0C7P2 107 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 LIAT1Q6ZQX7 453 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 SMDT1Q9H4I9 107 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 CALHM2Q9HA72 323 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 NKX2-6A6NCS4 301 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 DHHO43323 396 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 MLF1P58340 268 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 TNFRSF9Q07011 255 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 Q0VFX4 171 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 MPV17LQ2QL34 196 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 CABLES2Q9BTV7 478 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 SH2D2AQ9NP31 389 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 PLEK2Q9NYT0 353 aa15.26■□□□□ 0.03
SQSTM1-202ENST00000389805 CD55P08174 381 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 FOLR3P41439 243 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 GRB2P62993 217 aaKnown RBP15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 PDCD1Q15116 288 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 LBHQ53QV2 105 aaPredicted RBP15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 GJC3Q8NFK1 279 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 OR4X1Q8NH49 305 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 CLDND2Q8NHS1 167 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 PITPNC1Q9UKF7 332 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 GAB2Q9UQC2 676 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 IFNL4K9M1U5 179 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 HSPB1P04792 205 aaKnown RBP15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 CCL1P22362 96 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 CD81P60033 236 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 ZNF266Q14584 549 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 PPA1Q15181 289 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 SNAI3Q3KNW1 292 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 CMTM1Q8IZ96 169 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 OR2AE1Q8NHA4 323 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 TMEM54Q969K7 222 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 C18orf12Q96KH6 178 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 WFIKKN1Q96NZ8 548 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 ULBP2Q9BZM5 246 aa15.25■□□□□ 0.03
SQSTM1-202ENST00000389805 PAX1P15863 534 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 DYNLT3P51808 116 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 SLC35E3Q7Z769 313 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 LGI3Q8N145 548 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 MSI2Q96DH6 328 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 GLRX2Q9NS18 164 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 CBLN4Q9NTU7 201 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 CLDN34H7C241 214 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 ALDH3B1P43353 468 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 ZNF506Q5JVG8 444 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 LRP11Q86VZ4 500 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 TP53RKQ96S44 253 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 PIGLQ9Y2B2 252 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 ZNF25P17030 456 aaPredicted RBP15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 FKBP2P26885 142 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 COL10A1Q03692 680 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 SLC10A1Q14973 349 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 FAM189A2Q15884 450 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 CXorf66Q5JRM2 361 aaPredicted RBP15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 DNLZQ5SXM8 178 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 SSC4DQ8WTU2 575 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 SNHG12Q9BXW3 62 aa15.24■□□□□ 0.03
SQSTM1-202ENST00000389805 NCKAP5O14513 1909 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 FAM186AA6NE01 2351 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 CBR3O75828 277 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 OR4A8P0C604 315 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 RAC1P63000 192 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 P2RY6Q15077 328 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 C10orf128Q5T292 105 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 TMEM183AQ8IXX5 376 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 TMEM105Q8N8V8 129 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 PROB1E7EW31 1015 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 M0R135 149 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 HSPA12AO43301 675 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 SPRY1O43609 319 aaPredicted RBP15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 TCN2P20062 427 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 ECI1P42126 302 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 FGF8P55075 233 aaPredicted RBP15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 ZNF799Q96GE5 643 aa15.23■□□□□ 0.03
SQSTM1-202ENST00000389805 TECTAO75443 2155 aa15.22■□□□□ 0.03
SQSTM1-202ENST00000389805 DVL1O14640 695 aa15.22■□□□□ 0.03
SQSTM1-202ENST00000389805 TRAPPC6AO75865 159 aa15.22■□□□□ 0.03
SQSTM1-202ENST00000389805 TIPARPQ7Z3E1 657 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-202ENST00000389805 TMEM252Q8N6L7 170 aa15.22■□□□□ 0.03
SQSTM1-202ENST00000389805 RAB24Q969Q5 203 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms