RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 PRTFDC1Q9NRG1 225 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 NECAP2Q9NVZ3 263 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 PLEKHJ1Q9NW61 149 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 OR6C3Q9NZP0 311 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 KIR2DS5A0A0G2JLQ3 304 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 A0A0G2JNG1 304 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 KIR2DS3K7RE56 304 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 TMEM50AO95807 157 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 IL11P20809 199 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 TFPI2P48307 235 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 GFERP55789 205 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 SOX8P57073 446 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 KIR2DS5Q14953 304 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF787Q6DD87 383 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 LRP11Q86VZ4 500 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 LMX1AQ8TE12 382 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 SDSLQ96GA7 329 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 OR5B12Q96R08 314 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 NXF5Q9H1B4 397 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 A0A1W2PPC4 97 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 MS4A18H0YCH9 400 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 H7BYZ3 331 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 CNN1P51911 297 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 BATFQ16520 125 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 MS4A18Q3C1V0 323 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 TDRG1Q3Y452 100 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 CXorf66Q5JRM2 361 aaPredicted RBP12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 COL5A1-AS1Q5SY13 56 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 MEX3BQ6ZN04 569 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 C11orf42Q8N5U0 333 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 ZCCHC14Q8WYQ9 949 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 TP53RKQ96S44 253 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 MOB1AQ9H8S9 216 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 RPRMQ9NS64 109 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 PDGFBP01127 241 aaPredicted RBP12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 HIST1H3AP68431 136 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 KCNMB1Q16558 191 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 TMEM241Q24JQ0 296 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 DEFB133Q30KQ1 61 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 CYP2G1PQ6ZSU1 146 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 MBD3L1Q8WWY6 194 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 SLC46A1Q96NT5 459 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 AGMATQ9BSE5 352 aa12.68□□□□□ -0.38
VPS9D1-201ENST00000389386 SHANK1Q9Y566 2161 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 A0A1W2PPQ1 181 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 CEBPZOSA8MTT3 80 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 NPIPA5E9PKD4 350 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 YPEL1O60688 119 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 HRASP01112 189 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 TYMSP04818 313 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 MYF5P13349 255 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 OPRM1P35372 400 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF92Q03936 586 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 BAXQ07812 192 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF154Q13106 437 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 BSXQ3C1V8 233 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 LCN15Q6UWW0 184 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 FAM57BQ71RH2 274 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 TMEM256Q8N2U0 113 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 CISD2Q8N5K1 135 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 YPEL2Q96QA6 119 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 ATP5SQ99766 215 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 SMIM7Q9BQ49 75 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 NPIPA1Q9UND3 350 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 YLPM1P49750 1951 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 CCL1P22362 96 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 RAB7AP51149 207 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF41P51814 821 aaPredicted RBP12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF121P58317 390 aaPredicted RBP12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF726P1Q15940 193 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 PRR22Q8IZ63 422 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF321PQ8N8H1 164 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 OR1N1Q8NGS0 311 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 ADAMTS18Q8TE60 1221 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 RASL10BQ96S79 203 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 IMMP2LQ96T52 175 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 PARD6GQ9BYG4 376 aaPredicted RBP12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 AURKAIP1Q9NWT8 199 aaPredicted RBP12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 WNT16Q9UBV4 365 aa12.67□□□□□ -0.38
VPS9D1-201ENST00000389386 NUPR1O60356 82 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 RPL23P62829 140 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 IL24Q13007 206 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 KIAA2026Q5HYC2 2103 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 MYO7BQ6PIF6 2116 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 TEX43Q6ZNM6 134 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 OR2T10Q8NGZ9 312 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 SOHLH2Q9NX45 425 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF581Q9P0T4 197 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 MRPS17Q9Y2R5 130 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 WDFY3Q8IZQ1 3526 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 CBR3O75828 277 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 PGCP20142 388 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 ENDOGQ14249 297 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 SSX7Q7RTT5 188 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 MRGPRGQ86SM5 289 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 AGBL5Q8NDL9 886 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 OR2V1Q8NHB1 315 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 IFI44Q8TCB0 444 aa12.66□□□□□ -0.38
VPS9D1-201ENST00000389386 MMABQ96EY8 250 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms