RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 GRK7Q8WTQ7 553 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SCFD1Q8WVM8 642 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 NELFBQ8WX92 580 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 BCL2L2Q92843 193 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 NXNL1Q96CM4 212 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 AP2M1Q96CW1 435 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC25A44Q96H78 314 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 TIGD1Q96MW7 591 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 TGS1Q96RS0 853 aaKnown RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 NMNAT3Q96T66 252 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC25A21Q9BQT8 299 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 PYM1Q9BRP8 204 aaKnown RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 GGACTQ9BVM4 153 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 WDR12Q9GZL7 423 aaKnown RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC25A51Q9H1U9 297 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 MMADHCQ9H3L0 296 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SMDT1Q9H4I9 107 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 NHEJ1Q9H9Q4 299 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 POPDC3Q9HBV1 291 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMEM38BQ9NVV0 291 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 SMOXQ9NWM0 555 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 NINJ2Q9NZG7 142 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 TBC1D7Q9P0N9 293 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMEM14CQ9P0S9 112 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 ORC3Q9UBD5 711 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR52A1Q9UKL2 312 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 VANGL2Q9ULK5 521 aa-1.87□□□□□ -2.71
RNU6-540P-201ENST00000384622 NRXN1Q9ULB1 1477 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 RAPGEF2Q9Y4G8 1499 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 PCDH11XQ9BZA7 1347 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 NUP188Q5SRE5 1749 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRAV7A0A075B6U4 112 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRAV14DV4A0A0A6YYC5 116 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 NBDYA0A0U1RRE5 68 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CIB4A0PJX0 185 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 HELTA6NFD8 242 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 PGPEP1LA6NFU8 196 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 URADA6NGE7 173 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC9B1P1A6NJY1 282 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 GABRR3A8MPY1 467 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 A8MWV9 139 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMEM238C9JI98 176 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 F5H5T6 163 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 INE1O15225 51 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 ATP8B1O43520 1251 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 SULT1B1O43704 296 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 ATP9AO75110 1047 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 DHRS3O75911 302 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR2J3O76001 311 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 IFNA4P05014 189 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 IFNA16P05015 189 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CSH1P0DML2 217 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CSH2P0DML3 217 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 UBL4AP11441 157 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CPMP14384 443 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 HTN1P15515 57 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 ERCC2P18074 760 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 IL1RNP18510 177 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 PRPS1L1P21108 318 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CD82P27701 267 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 RPL28P46779 137 aaKnown RBP-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 DHPSP49366 369 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 PRKXP51817 358 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CDH13P55290 713 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CAV3P56539 151 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 HSD17B7P56937 341 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 POLR2LP62875 67 aaKnown RBP-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 ACTG2P63267 376 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 SRYQ05066 204 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 AIMP1Q12904 312 aaKnown RBP-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 SELPLGQ14242 412 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 MXD4Q14582 209 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 POU6F1Q14863 301 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 NCF4Q15080 339 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 P2RY14Q15391 338 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 AADACL3Q5VUY0 350 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR52E8Q6IFG1 317 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 KCNIP4Q6PIL6 250 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CASC2Q6XLA1 102 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC36A1Q7Z2H8 476 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMED4Q7Z7H5 227 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CHST4Q8NCG5 386 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR6Q1Q8NGQ2 317 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 PFN4Q8NHR9 129 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CLDND2Q8NHS1 167 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 EXOC6Q8TAG9 804 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 SPACA9Q96E40 222 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 DTNBP1Q96EV8 351 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CPB2Q96IY4 423 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 PKNOX2Q96KN3 472 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 C16orf45Q96MC5 204 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR2V2Q96R30 315 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 DHRS9Q9BPW9 319 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CMSS1Q9BQ75 279 aaKnown RBP-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 C11orf70Q9BRQ4 267 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRIM62Q9BVG3 475 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 CHID1Q9BWS9 393 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 BEX2Q9BXY8 128 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 NKX6-2Q9C056 277 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 COMMD5Q9GZQ3 224 aa-1.88□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms