RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 POMT1Q9Y6A1 747 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 TGFBR3LH3BV60 316 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 K7EQM0 130 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 TGOLN2O43493 480 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 AARDQ4LEZ3 155 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 C1orf100Q5SVJ3 147 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 WNT2BQ93097 391 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 GINS3Q9BRX5 216 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 WDR54Q9H977 334 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 RCC2Q9P258 522 aaKnown RBP14.96□□□□□ -0.01
SGCB-201ENST00000381431 WNK3Q9BYP7 1800 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 AGFG2O95081 481 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 CLEC3BP05452 202 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 PGA4P0DJD7 388 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 TNFRSF1AP19438 455 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 RSPO4Q2I0M5 234 aaPredicted RBP14.96□□□□□ -0.01
SGCB-201ENST00000381431 DCAF10Q5QP82 559 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 C1QTNF12Q5T7M4 302 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 TMEM211Q6ICI0 200 aa14.96□□□□□ -0.01
SGCB-201ENST00000381431 TRAV20A0A0B4J274 112 aa14.96□□□□□ -0.02
SGCB-201ENST00000381431 COX7A2P2O60397 106 aa14.96□□□□□ -0.02
SGCB-201ENST00000381431 ADH4P08319 380 aa14.96□□□□□ -0.02
SGCB-201ENST00000381431 CT45A10P0DMU9 189 aa14.96□□□□□ -0.02
SGCB-201ENST00000381431 ZNF362Q5T0B9 420 aaPredicted RBP14.96□□□□□ -0.02
SGCB-201ENST00000381431 OR1K1Q8NGR3 316 aa14.96□□□□□ -0.02
SGCB-201ENST00000381431 RBBP6Q7Z6E9 1792 aaKnown RBP14.96□□□□□ -0.02
SGCB-201ENST00000381431 HLA-DRB3P79483 266 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 NCMAPQ5T1S8 102 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 MS4A3Q96HJ5 214 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 GNB4Q9HAV0 340 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 SLC35D1Q9NTN3 355 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 GPR132Q9UNW8 380 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 MED13LQ71F56 2210 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 CHD5Q8TDI0 1954 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 IGSF11Q5DX21 431 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 TMEM65Q6PI78 240 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 HES4Q9HCC6 221 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 CACNA1BQ00975 2339 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 RALGAPA1Q6GYQ0 2036 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 HRASP01112 189 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 FCGR3AP08637 254 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 CLPPQ16740 277 aaPredicted RBP14.95□□□□□ -0.02
SGCB-201ENST00000381431 SMIM15Q7Z3B0 74 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 MOB3BQ86TA1 216 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 NR2C2APQ86WQ0 139 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 OR2M7Q8NG81 312 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 J3QT63 122 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 TIAF1O95411 115 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 CDS2O95674 445 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 RECKO95980 971 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 IGKV3-11P04433 115 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 CDC34P49427 236 aaPredicted RBP14.95□□□□□ -0.02
SGCB-201ENST00000381431 GUCA2BQ16661 112 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 VAX1Q5SQQ9 334 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 SLC36A1Q7Z2H8 476 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 STPG2Q8N412 459 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 TPRX1Q8N7U7 411 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 HS3ST3B1Q9Y662 390 aa14.95□□□□□ -0.02
SGCB-201ENST00000381431 BDP1A6H8Y1 2624 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 A0A1W2PQM1 296 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 CRYBA1P05813 215 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 NAT1P18440 290 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 ATP6V0CP27449 155 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 PMELP40967 661 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 FAM3AP98173 230 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 RUNX1Q01196 453 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 NUFIP2Q7Z417 695 aaKnown RBP14.94□□□□□ -0.02
SGCB-201ENST00000381431 SIGLECL1Q8N7X8 197 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 FAM181AQ8N9Y4 354 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 ZNF251Q9BRH9 671 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 OR2J1Q9GZK6 312 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 A0A0B4J293 547 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 CHEK1O14757 476 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 ZNF345Q14585 488 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 ZNF519Q8TB69 540 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 ZNF586Q9NXT0 402 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 TMEM229AB2RXF0 380 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 NDUFB3O43676 98 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 MDH2P40926 338 aaKnown RBP14.94□□□□□ -0.02
SGCB-201ENST00000381431 KRTDAPP60985 99 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 OR5A2Q8NGI9 324 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 SLC25A40Q8TBP6 338 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 SEC11CQ9BY50 192 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 NPDC1Q9NQX5 325 aaPredicted RBP14.94□□□□□ -0.02
SGCB-201ENST00000381431 IL36GQ9NZH8 169 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 KIAA1456Q9P272 454 aa14.94□□□□□ -0.02
SGCB-201ENST00000381431 A0A0U1RQV5 110 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 OR5H1A6NKK0 313 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 CTRB1P17538 263 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 KLF3P57682 345 aaPredicted RBP14.93□□□□□ -0.02
SGCB-201ENST00000381431 PMS2CLQ68D20 193 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 CTRB2Q6GPI1 263 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 GPR87Q9BY21 358 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 DOCK7Q96N67 2140 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 A0A0G2JK05 382 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 A0A1W2PNV4 684 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 CRYABP02511 175 aaKnown RBP14.93□□□□□ -0.02
SGCB-201ENST00000381431 TNFAIP6P98066 277 aaPredicted RBP14.93□□□□□ -0.02
SGCB-201ENST00000381431 SLC25A47Q6Q0C1 308 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 ZNF71Q9NQZ8 489 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms