RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 CALYQ9NYX4 217 aa10.38□□□□□ -0.75
RPAIN-202ENST00000381208 TCRBV4S1A1TA0A5B7 111 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 ADARB2-AS1A8MUL3 147 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 ZNF780AO75290 641 aaPredicted RBP10.37□□□□□ -0.75
RPAIN-202ENST00000381208 DUS4LO95620 317 aaKnown RBP10.37□□□□□ -0.75
RPAIN-202ENST00000381208 CGB3P0DN86 165 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 CGB7P0DN87 165 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 JUNBP17275 347 aaPredicted RBP10.37□□□□□ -0.75
RPAIN-202ENST00000381208 CD33P20138 364 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 NFYBP25208 207 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 GLP1RP43220 463 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 OR3A4PP47883 348 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 RAB7AP51149 207 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 MADCAM1Q13477 382 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 RBM39Q14498 530 aaKnown RBP10.37□□□□□ -0.75
RPAIN-202ENST00000381208 ABCA11PQ4W5N1 156 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 NHLRC3Q5JS37 347 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 ASCL4Q6XD76 172 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 SATL1Q86VE3 508 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 OR8H3Q8N146 312 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 SGCDQ92629 289 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 TOMM40LQ969M1 308 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 NR1H4Q96RI1 486 aaPredicted RBP10.37□□□□□ -0.75
RPAIN-202ENST00000381208 S100A13Q99584 98 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 SLC29A1Q99808 456 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 METTL9Q9H1A3 318 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 IFT22Q9H7X7 185 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 TMEM138Q9NPI0 162 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 IDI2-AS1Q9NZ38 188 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 IL36GQ9NZH8 169 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 AASSQ9UDR5 926 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 KIF25Q9UIL4 384 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 MOB4Q9Y3A3 225 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 HSPE1-MOB4S4R3N1 261 aa10.37□□□□□ -0.75
RPAIN-202ENST00000381208 TRAV24A0A0B4J272 114 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM90A18PA6NE21 464 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM90A16PA6NEW6 464 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM90A20PA6NIJ5 464 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM90A9PA6NNJ1 464 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM90A12PA8MX19 464 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM90A5PA8MXJ8 464 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 NPIPB11E5RHQ5 1161 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 E9PI62 339 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 J3QR06 171 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 GABRPO00591 440 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 PIN1P1O15428 100 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 CSTBP04080 98 aaKnown RBP10.36□□□□□ -0.75
RPAIN-202ENST00000381208 LPLP06858 475 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM90A15PP0C7V4 464 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM90A13PP0C7W8 464 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM90A14PP0C7W9 464 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM90A24PP0C7X0 464 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 GZMHP20718 246 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 GDNFP39905 211 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 TMEM95Q3KNT9 176 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 BAIAP2L2Q6UXY1 529 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 RNF144BQ7Z419 303 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 OSR2Q8N2R0 312 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 TMEM106AQ96A25 262 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 GPR61Q9BZJ8 451 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM192AQ9GZU8 254 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 PPIL3Q9H2H8 161 aaKnown RBP10.36□□□□□ -0.75
RPAIN-202ENST00000381208 RAB9BQ9NP90 201 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 ING3Q9NXR8 418 aa10.36□□□□□ -0.75
RPAIN-202ENST00000381208 SMPD3Q9NY59 655 aaPredicted RBP10.36□□□□□ -0.75
RPAIN-202ENST00000381208 FAM172BPA6NC97 362 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 HSPB6O14558 160 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 FGF16O43320 207 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 PF4P02776 101 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 LIMS3P0CW19 117 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 LIMS4P0CW20 117 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 MYL12AP19105 171 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 CD24P25063 80 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 SOX2P48431 317 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 LOXL3P58215 753 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 SLC35A2P78381 396 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 GPR176Q14439 515 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 RSBN1Q5VWQ0 802 aaPredicted RBP10.35□□□□□ -0.75
RPAIN-202ENST00000381208 HIST2H2BDQ6DRA6 164 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 OR13A1Q8NGR1 328 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 MRAPQ8TCY5 172 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 APH1BQ8WW43 257 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 PHF21AQ96BD5 680 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 SMIM19Q96E16 107 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 RCC1LQ96I51 464 aaKnown RBP10.35□□□□□ -0.75
RPAIN-202ENST00000381208 CHCHD3Q9NX63 227 aaKnown RBP10.35□□□□□ -0.75
RPAIN-202ENST00000381208 TAS2R4Q9NYW5 299 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 CKLFQ9UBR5 152 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 RAB26Q9ULW5 256 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 ST3GAL6Q9Y274 331 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 ZNF281Q9Y2X9 895 aa10.35□□□□□ -0.75
RPAIN-202ENST00000381208 EXOSC1Q9Y3B2 195 aaKnown RBP10.35□□□□□ -0.75
RPAIN-202ENST00000381208 TMEM30CPA0ZSE6 113 aa10.34□□□□□ -0.75
RPAIN-202ENST00000381208 OR7C1O76099 320 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-202ENST00000381208 HTR3BO95264 441 aa10.34□□□□□ -0.75
RPAIN-202ENST00000381208 BDKRB2P30411 391 aa10.34□□□□□ -0.75
RPAIN-202ENST00000381208 SLC6A1P30531 599 aa10.34□□□□□ -0.75
RPAIN-202ENST00000381208 ZNF93P35789 620 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-202ENST00000381208 MPV17LQ2QL34 196 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms