RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 SHANK1Q9Y566 2161 aa12.97□□□□□ -0.33
RAB3IP-204ENST00000378815 C5orf51A6NDU8 294 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 ARPC5O15511 151 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 ADAP1O75689 374 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 KCNJ3P48549 501 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 SELENOVP59797 346 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 SMIM21Q3B7S5 101 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 OR10Z1Q8NGY1 313 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 RTN4IP1Q8WWV3 396 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 GALNT14Q96FL9 552 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 MEGF10Q96KG7 1140 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 OR2V2Q96R30 315 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 NMES1Q9C002 83 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 NAA60Q9H7X0 242 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 C13orf42A0A1B0GVH6 325 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 L7N2F9 121 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 ATXN7L3Q14CW9 347 aaPredicted RBP12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 MBNL3Q9NUK0 354 aaKnown RBP12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 COMMD9Q9P000 198 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 WIPI2Q9Y4P8 454 aa12.96□□□□□ -0.33
RAB3IP-204ENST00000378815 TRBV6-7A0A0A0MS04 114 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 ABCD4O14678 606 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 SLC25A4P12235 298 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 RBMXP38159 391 aaKnown RBP12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 CYCSP99999 105 aaKnown RBP12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 BSPH1Q075Z2 132 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 NDUFA5Q16718 116 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 PHLDA2Q53GA4 152 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 SPRNQ5BIV9 151 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 TMEM65Q6PI78 240 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 ZNF767PQ75MW2 155 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 PIEZO1Q92508 2521 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 SRRM5B3KS81 715 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 NPIPB11E5RHQ5 1161 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 M0R233 179 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 SPRY3O43610 288 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 MPC2O95563 127 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 RPA2P15927 270 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 C4BPBP20851 252 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 GNRHRP30968 328 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 C11orf87Q6NUJ2 197 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 TEX261Q6UWH6 196 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 OR11L1Q8NGX0 322 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 WFIKKN1Q96NZ8 548 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 ITGB1BP2Q9UKP3 347 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 TRAPPC2LQ9UL33 140 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 KCNIP3Q9Y2W7 256 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 U3KQ87 197 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 NCOR2Q9Y618 2525 aa12.95□□□□□ -0.34
RAB3IP-204ENST00000378815 MPTX1A8MV57 137 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 EGR1P18146 543 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 GATA4P43694 442 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 OPCMLQ14982 345 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 LRRC37A5PQ49AS3 106 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 CCDC71LQ8N9Z2 235 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 KDF1Q8NAX2 398 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 OR8H1Q8NGG4 311 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 KIRREL1Q96J84 757 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 TRAV39A0A0B4J263 110 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 IGKV1D-13A0A0B4J2D9 117 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 OR5AC1P0C628 307 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 IGKV1-13P0DP09 117 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 ASCL1P50553 236 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 TMEM187Q14656 261 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 LDLRAD3Q86YD5 345 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 FAM90A1Q86YD7 464 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 H1FOOQ8IZA3 346 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 OR10J5Q8NHC4 309 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 METTL8Q9H825 291 aaKnown RBP12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 RDH8Q9NYR8 311 aa12.94□□□□□ -0.34
RAB3IP-204ENST00000378815 TMEM30CPA0ZSE6 113 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 ZZEF1O43149 2961 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 LHBP01229 141 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 IGHV1-46P01743 117 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 HMGN3Q15651 99 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 SLC35E4Q6ICL7 350 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 ZNF546Q86UE3 836 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 MOGAT3Q86VF5 341 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 FAM185AQ8N0U4 392 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 GCSAMQ8N6F7 178 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 SECTM1Q8WVN6 248 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 ITLN1Q8WWA0 313 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 OR10C1Q96KK4 312 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 SUCNR1Q9BXA5 334 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 SEBOXQ9HB31 216 aaPredicted RBP12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 POLEQ07864 2286 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 ATXN7O15265 892 aaPredicted RBP12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 TFF1P04155 84 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 HOXB5P09067 269 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 PSMB6P28072 239 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 S100A11P31949 105 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 OR3A1P47881 315 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 RND3P61587 244 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 COL10A1Q03692 680 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 ADIPOQQ15848 244 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 SP6Q3SY56 376 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 TMUB2Q71RG4 321 aa12.93□□□□□ -0.34
RAB3IP-204ENST00000378815 SLC7A5P1Q8MH63 180 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms