RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 HLA-HP01893 362 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 OR10J1P30954 320 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 GNRHRP30968 328 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 CEBPGP53567 150 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 RBM11P57052 281 aaKnown RBP7.08□□□□□ -1.28
PTPRR-203ENST00000378778 HNRNPKP61978 463 aaKnown RBP eCLIP7.08□□□□□ -1.28
PTPRR-203ENST00000378778 COL10A1Q03692 680 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 ATP6V1FQ16864 119 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 BSXQ3C1V8 233 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 FAM27BQ5VT28 67 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 SLC25A24Q6NUK1 477 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 LANCL3Q6ZV70 420 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 LINC00596Q86U02 117 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 THNSL2Q86YJ6 484 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 ODF3L1Q8IXM7 274 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 GPR137CQ8N3F9 429 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 PLPPR1Q8TBJ4 325 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 LIN37Q96GY3 246 aaPredicted RBP7.08□□□□□ -1.28
PTPRR-203ENST00000378778 MTIF3Q9H2K0 278 aaKnown RBP7.08□□□□□ -1.28
PTPRR-203ENST00000378778 TRAV9-1A0A075B6T8 112 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 TRBV6-6A0A0A6YYG2 114 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 A0A1B0GV50 99 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 B4E171 279 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 CELA2BP08218 269 aaPredicted RBP7.08□□□□□ -1.28
PTPRR-203ENST00000378778 CST2P09228 141 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 CRYGSP22914 178 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 CDAP32320 146 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 OPRM1P35372 400 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 MDH2P40926 338 aaKnown RBP7.08□□□□□ -1.28
PTPRR-203ENST00000378778 TSPAN7P41732 249 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 ARL4DP49703 201 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 LRRC75BQ2VPJ9 315 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 PDZD11Q5EBL8 140 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 MEX3BQ6ZN04 569 aaKnown RBP7.08□□□□□ -1.28
PTPRR-203ENST00000378778 SPRED2Q7Z698 418 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 NFAM1Q8NET5 270 aaPredicted RBP7.08□□□□□ -1.28
PTPRR-203ENST00000378778 NABP1Q96AH0 204 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 REEP6Q96HR9 211 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 OR51I2Q9H344 312 aa7.08□□□□□ -1.28
PTPRR-203ENST00000378778 MARCH11A6NNE9 402 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 DHHO43323 396 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 CHST1O43916 411 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 EFNA2O43921 213 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 GALR1P47211 349 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 TDGF1P3P51864 188 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 PAX9P55771 341 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 UBE2NP61088 152 aaKnown RBP7.07□□□□□ -1.28
PTPRR-203ENST00000378778 PAX5Q02548 391 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 TMEM249Q2WGJ8 235 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 TMEM240Q5SV17 173 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 RHBDD2Q6NTF9 364 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 FADS6Q8N9I5 356 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 OR2M3Q8NG83 312 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 OR2T10Q8NGZ9 312 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 SMIM7Q9BQ49 75 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 TXNDC17Q9BRA2 123 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 OR6C3Q9NZP0 311 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 ATXN7L1Q9ULK2 861 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-203ENST00000378778 C17orf51A8MQB3 221 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 H3BML4 177 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 DLL1O00548 723 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 NRASP01111 189 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 PSMB3P49720 205 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 RRADP55042 308 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 PAFAH1B2P68402 229 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 MEF2BQ02080 365 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-203ENST00000378778 CLN3Q13286 438 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 TSPO2Q5TGU0 170 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 UNQ6494/PRO21346Q6UXR6 183 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 ZNF66Q6ZN08 573 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 C16orf82Q7Z2V1 217 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 C5orf24Q7Z6I8 188 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 ZNF573Q86YE8 665 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 GBGT1Q8N5D6 347 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 OR11L1Q8NGX0 322 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 NPRL2Q8WTW4 380 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 GMPPAQ96IJ6 420 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-203ENST00000378778 EAF1Q96JC9 268 aaPredicted RBP7.07□□□□□ -1.28
PTPRR-203ENST00000378778 C20orf144Q9BQM9 153 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 NUDT22Q9BRQ3 303 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 SF3B5Q9BWJ5 86 aaKnown RBP7.07□□□□□ -1.28
PTPRR-203ENST00000378778 RPRMQ9NS64 109 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 GPR173Q9NS66 373 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 KLRF1Q9NZS2 232 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 MMP17Q9ULZ9 603 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 ST3GAL6Q9Y274 331 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 CUL9Q8IWT3 2517 aa7.07□□□□□ -1.28
PTPRR-203ENST00000378778 ALPK2Q86TB3 2170 aa7.06□□□□□ -1.28
PTPRR-203ENST00000378778 A0A1W2PPC4 97 aa7.06□□□□□ -1.28
PTPRR-203ENST00000378778 LNP1A1A4G5 178 aa7.06□□□□□ -1.28
PTPRR-203ENST00000378778 MAP1LC3B2A6NCE7 125 aa7.06□□□□□ -1.28
PTPRR-203ENST00000378778 F5H5K5 113 aa7.06□□□□□ -1.28
PTPRR-203ENST00000378778 ONECUT2O95948 504 aa7.06□□□□□ -1.28
PTPRR-203ENST00000378778 IL18BPO95998 194 aa7.06□□□□□ -1.28
PTPRR-203ENST00000378778 COX5BP10606 129 aa7.06□□□□□ -1.28
PTPRR-203ENST00000378778 ZNF92Q03936 586 aa7.06□□□□□ -1.28
PTPRR-203ENST00000378778 RSPO1Q2MKA7 263 aaPredicted RBP7.06□□□□□ -1.28
PTPRR-203ENST00000378778 CXorf66Q5JRM2 361 aaPredicted RBP7.06□□□□□ -1.28
PTPRR-203ENST00000378778 RABEPKQ7Z6M1 372 aa7.06□□□□□ -1.28
PTPRR-203ENST00000378778 PLXDC1Q8IUK5 500 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms