RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 SCTP09683 121 aa12.4□□□□□ -0.42
POLR1E-202ENST00000377798 CD80P33681 288 aa12.4□□□□□ -0.42
POLR1E-202ENST00000377798 HLA-DRB3P79483 266 aa12.4□□□□□ -0.42
POLR1E-202ENST00000377798 FAM201AQ5SY85 155 aa12.4□□□□□ -0.42
POLR1E-202ENST00000377798 SLC35E4Q6ICL7 350 aa12.4□□□□□ -0.42
POLR1E-202ENST00000377798 FAHD2BQ6P2I3 314 aaPredicted RBP12.4□□□□□ -0.42
POLR1E-202ENST00000377798 ZNF843Q8N446 348 aa12.4□□□□□ -0.42
POLR1E-202ENST00000377798 ASCC1Q8N9N2 400 aaKnown RBP12.4□□□□□ -0.42
POLR1E-202ENST00000377798 OR11H7Q8NGC8 314 aa12.4□□□□□ -0.42
POLR1E-202ENST00000377798 FAHD2AQ96GK7 314 aa12.4□□□□□ -0.42
POLR1E-202ENST00000377798 C5orf66Q9H5L9 145 aa12.4□□□□□ -0.42
POLR1E-202ENST00000377798 RANGRFQ9HD47 186 aaPredicted RBP12.4□□□□□ -0.42
POLR1E-202ENST00000377798 MBNL3Q9NUK0 354 aaKnown RBP12.4□□□□□ -0.42
POLR1E-202ENST00000377798 ZNF222Q9UK12 451 aa12.4□□□□□ -0.42
POLR1E-202ENST00000377798 TMEM30CPA0ZSE6 113 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 ZNF737O75373 536 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 CTXN2P0C2S0 81 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 SULT1A3P0DMM9 295 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 SULT1A4P0DMN0 295 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 FCGR2CP31995 323 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 TAS2R31P59538 309 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 SNRPD2P62316 118 aaKnown RBP12.39□□□□□ -0.43
POLR1E-202ENST00000377798 BAMBIQ13145 260 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 HERPUD1Q15011 391 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 TGIF2LYQ8IUE0 185 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 MUC20Q8N307 709 aaPredicted RBP12.39□□□□□ -0.43
POLR1E-202ENST00000377798 OR4A4PQ8NGN8 299 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 ANGPTL6Q8NI99 470 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 ZNF431Q8TF32 576 aaPredicted RBP12.39□□□□□ -0.43
POLR1E-202ENST00000377798 TMPRSS13Q9BYE2 586 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 SHARPINQ9H0F6 387 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 TRAPPC2LQ9UL33 140 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 TANC2Q9HCD6 1990 aa12.39□□□□□ -0.43
POLR1E-202ENST00000377798 C19orf84I3L1E1 186 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 ZNF205O95201 554 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 GABRA2P47869 451 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 SEC61A1P61619 476 aaKnown RBP12.38□□□□□ -0.43
POLR1E-202ENST00000377798 PAX5Q02548 391 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 DHRS2Q13268 280 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 C5orf24Q7Z6I8 188 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 ADAD2Q8NCV1 583 aaKnown RBP12.38□□□□□ -0.43
POLR1E-202ENST00000377798 TMEM185AQ8NFB2 350 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 COQ2Q96H96 371 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 FYTTD1Q96QD9 318 aaKnown RBP12.38□□□□□ -0.43
POLR1E-202ENST00000377798 HRNRQ86YZ3 2850 aaPredicted RBP12.38□□□□□ -0.43
POLR1E-202ENST00000377798 IGKV1-6A0A0C4DH72 117 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 BET1O15155 118 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 HLA-AP01891 365 aaKnown RBP12.38□□□□□ -0.43
POLR1E-202ENST00000377798 TK1P04183 234 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 PGAM2P15259 253 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 MUC1P15941 1255 aaPredicted RBP12.38□□□□□ -0.43
POLR1E-202ENST00000377798 AKR1C4P17516 323 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 IGFBP2P18065 325 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 CXCL3P19876 107 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 UBE2MP61081 183 aaKnown RBP12.38□□□□□ -0.43
POLR1E-202ENST00000377798 AESQ08117 197 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 PPP1R1AQ13522 171 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 C11orf91Q3C1V1 193 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 TMEM128Q5BJH2 165 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 TEX36Q5VZQ5 186 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 STUMQ69YW2 141 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 C1orf87Q8N0U7 546 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 PPP1R35Q8TAP8 253 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 MOB3AQ96BX8 217 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 SNX22Q96L94 193 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 RTBDNQ9BSG5 229 aaPredicted RBP12.38□□□□□ -0.43
POLR1E-202ENST00000377798 CABLES2Q9BTV7 478 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 FXYD6Q9H0Q3 95 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 DCAF16Q9NXF7 216 aa12.38□□□□□ -0.43
POLR1E-202ENST00000377798 ABCA4P78363 2273 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 DSCAMO60469 2012 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 LRBAP50851 2863 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 RAI1Q7Z5J4 1906 aaPredicted RBP12.37□□□□□ -0.43
POLR1E-202ENST00000377798 OOEPA6NGQ2 149 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 C1QL1O75973 258 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 PI3P19957 117 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 NFYAP23511 347 aaPredicted RBP12.37□□□□□ -0.43
POLR1E-202ENST00000377798 ZBTB25P24278 435 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 KRBOX4Q5JUW0 171 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 LYG2Q86SG7 212 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 TCTE3Q8IZS6 198 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 TMEM230Q96A57 120 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 KIF25Q9UIL4 384 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 PCDHB10Q9UN67 800 aa12.37□□□□□ -0.43
POLR1E-202ENST00000377798 C14orf166Q9Y224 244 aaKnown RBP12.37□□□□□ -0.43
POLR1E-202ENST00000377798 TRAV39A0A0B4J263 110 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 PPYP01298 95 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 AADACP22760 399 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 EIF2B2P49770 351 aaKnown RBP12.36□□□□□ -0.43
POLR1E-202ENST00000377798 PPOXP50336 477 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 FXYD4P59646 89 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 HERV-K104P61576 105 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 IL13RA1P78552 427 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 DHODHQ02127 395 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 HMGN3Q15651 99 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 ZNF561Q8N587 486 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 SPICQ8N5J4 248 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 ZFAND1Q8TCF1 268 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 TOMM40LQ969M1 308 aa12.36□□□□□ -0.43
POLR1E-202ENST00000377798 SDSLQ96GA7 329 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms