RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 TTRP02766 147 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 ANKRD34CP0C6C1 535 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 PATE4P0C8F1 98 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 SMIM6P0DI80 62 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 DAOP14920 347 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 ERVS71-1P61550 626 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 C8orf82Q6P1X6 216 aaPredicted RBP9.5□□□□□ -0.89
HIF3A-205ENST00000377670 WNT2BQ93097 391 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 CLDN23Q96B33 292 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 PHYHIPLQ96FC7 376 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 SFXN3Q9BWM7 321 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 IL36GQ9NZH8 169 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 GOLT1BQ9Y3E0 138 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 SFT2D2O95562 160 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 LTBRP36941 435 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 OR4C12Q96R67 309 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 WFDC6Q9BQY6 131 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 CLEC5AQ9NY25 188 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 MTFP1Q9UDX5 166 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 POMT1Q9Y6A1 747 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 TMEM218A2RU14 115 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 HMSDA8MTL9 139 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 PLPP2O43688 288 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 TMEM127O75204 238 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 IGF2P01344 180 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 ARRDC1Q8N5I2 433 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 OR11H7Q8NGC8 314 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 PP6455Q8WZ26 134 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 ADGRG7Q96K78 797 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 ABHD1Q96SE0 405 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 NAT8BQ9UHF3 227 aa9.5□□□□□ -0.89
HIF3A-205ENST00000377670 MS4A18H0YCH9 400 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 TNXAQ16473 311 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 TMEM241Q24JQ0 296 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 MS4A18Q3C1V0 323 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 DCAF12L2Q5VW00 463 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 FDCSPQ8NFU4 85 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 CIB3Q96Q77 187 aaPredicted RBP9.49□□□□□ -0.89
HIF3A-205ENST00000377670 PITPNC1Q9UKF7 332 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 ZNF835Q9Y2P0 537 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 LRP12Q9Y561 859 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 MED12Q93074 2177 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 ICE1Q9Y2F5 2266 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 BMPR1BO00238 502 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 RPL13AP40429 203 aaKnown RBP9.49□□□□□ -0.89
HIF3A-205ENST00000377670 CDKN2AP42771 156 aaKnown RBP9.49□□□□□ -0.89
HIF3A-205ENST00000377670 RNF165Q6ZSG1 346 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 ARHGEF39Q8N4T4 335 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 NPAS1Q99742 590 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 TMPRSS13Q9BYE2 586 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 CHST6Q9GZX3 395 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 TBX19O60806 448 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 CTAG2O75638 210 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 ZNF25P17030 456 aaPredicted RBP9.49□□□□□ -0.89
HIF3A-205ENST00000377670 ZBTB25P24278 435 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 SLC6A1P30531 599 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 PTGFRP43088 359 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 ERVFRD-1P60508 538 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 CCL8P80075 99 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 ECSCRQ19T08 205 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 Q1RN00 199 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 PACRGQ96M98 296 aaPredicted RBP9.49□□□□□ -0.89
HIF3A-205ENST00000377670 ATP5SQ99766 215 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 AAMDCQ9H7C9 122 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 MPC1Q9Y5U8 109 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 OR2J3O76001 311 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 OR5I1Q13606 314 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 LRP11Q86VZ4 500 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 TCTEX1D1Q8N7M0 179 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 LPAR3Q9UBY5 353 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 GYPAP02724 150 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 CCKARP32238 428 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 CHRNA7P36544 502 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 RPS4XP62701 263 aaKnown RBP9.49□□□□□ -0.89
HIF3A-205ENST00000377670 GPR137Q96N19 417 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 GPA33Q99795 319 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 EXOGQ9Y2C4 368 aaKnown RBP9.49□□□□□ -0.89
HIF3A-205ENST00000377670 INSIG2Q9Y5U4 225 aa9.49□□□□□ -0.89
HIF3A-205ENST00000377670 DICER1Q9UPY3 1922 aaKnown RBP9.49□□□□□ -0.89
HIF3A-205ENST00000377670 ANKRD20A5PA0PJZ0 165 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 LINC00862A6NCI5 91 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 OR5B21A6NL26 309 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 SERPINE3A8MV23 424 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 K7ESF4 209 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 CELA2AP08217 269 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 LIMK1P53667 647 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 PDCD1Q15116 288 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 Q3ZCU0 254 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 NHLRC2Q8NBF2 726 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 SPSB1Q96BD6 273 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 VSTM2LQ96N03 204 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 TMEM147Q9BVK8 224 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
HIF3A-205ENST00000377670 A0A1W2PN81 502 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 H3BMH7 237 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 FGF8P55075 233 aaPredicted RBP9.48□□□□□ -0.89
HIF3A-205ENST00000377670 LGALSLQ3ZCW2 172 aaPredicted RBP9.48□□□□□ -0.89
HIF3A-205ENST00000377670 VWA1Q6PCB0 445 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 Q6ZN92 141 aa9.48□□□□□ -0.89
HIF3A-205ENST00000377670 RBPMS2Q6ZRY4 209 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms