RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 CXCL3P19876 107 aa15.56■□□□□ 0.08
CNTNAP3-204ENST00000377656 SRP14P37108 136 aaKnown RBP15.56■□□□□ 0.08
CNTNAP3-204ENST00000377656 SLC25A45Q8N413 288 aa15.56■□□□□ 0.08
CNTNAP3-204ENST00000377656 WNK3Q9BYP7 1800 aa15.56■□□□□ 0.08
CNTNAP3-204ENST00000377656 GATCO43716 136 aaKnown RBP15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 CDS2O95674 445 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 LYZP61626 148 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 UBE2L3P68036 154 aaKnown RBP15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 C11orf42Q8N5U0 333 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 RNF2Q99496 336 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 OR2J1Q9GZK6 312 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 PHOX2AO14813 284 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 HPXP02790 462 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 FABP4P15090 132 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 GALR1P47211 349 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 LGALS7P47929 136 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 NANOS3P60323 173 aaKnown RBP15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 SPNS3Q6ZMD2 512 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 CACNA1EQ15878 2313 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 FGF8P55075 233 aaPredicted RBP15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 STPG1Q5TH74 334 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 ZBTB34Q8NCN2 500 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 MRPL24Q96A35 216 aaKnown RBP15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 LOXL4Q96JB6 756 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 UCNP55089 124 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 KLF9Q13886 244 aaPredicted RBP15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 ASCL5Q7RTU5 278 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 OR4A4PQ8NGN8 299 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 ATP5SQ99766 215 aa15.55■□□□□ 0.08
CNTNAP3-204ENST00000377656 TRAV39A0A0B4J263 110 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 PTX4Q96A99 478 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 RNF122Q9H9V4 155 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 TMEM167BQ9NRX6 74 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 SPINK4O60575 86 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 GAMTQ14353 236 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 INSIG2Q9Y5U4 225 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 CKAP5Q14008 2032 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 RPL36A-HNRNPH2H7BZ11 118 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 F2RL2O00254 374 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 PMCHP20382 165 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 LINC00596Q86U02 117 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 FGF11Q92914 225 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 ANGPTL4Q9BY76 406 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 MBPP02686 304 aaPredicted RBP15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 FCARP24071 287 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 TMEM251Q8N6I4 163 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 ZNF441Q8N8Z8 693 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 TECRQ9NZ01 308 aaKnown RBP15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 KLHDC2Q9Y2U9 406 aa15.54■□□□□ 0.08
CNTNAP3-204ENST00000377656 XIRP1Q702N8 1843 aaKnown RBP15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 CELA2AP08217 269 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 FGF5P12034 268 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 EFNB2P52799 333 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 SPCS3P61009 180 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 SSX8Q7RTT4 187 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 C12orf57Q99622 126 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 Q9N2K0 584 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 CLN8Q9UBY8 286 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 RBFOX3A6NFN3 312 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 TMEM65Q6PI78 240 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 FAM24BQ8N5W8 94 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 DPF1Q92782 380 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 MRGPRFQ96AM1 343 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 TOLLIPQ9H0E2 274 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 PIPOXQ9P0Z9 390 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 LPAR3Q9UBY5 353 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 RTTNQ86VV8 2226 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 GNG7O60262 68 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 KIR3DL2P43630 455 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 LIMS1P48059 325 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 MOGAT2Q3SYC2 334 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 PRNDQ9UKY0 176 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 COL11A1P12107 1806 aaPredicted RBP15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 A0A0U1RQV5 110 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 CD1AP06126 327 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 CLEC9AQ6UXN8 241 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 HOGA1Q86XE5 327 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 FLYWCH2Q96CP2 140 aaKnown RBP15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 SLC7A10Q9NS82 523 aa15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 SIRT4Q9Y6E7 314 aaPredicted RBP15.53■□□□□ 0.08
CNTNAP3-204ENST00000377656 ALPK2Q86TB3 2170 aa15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 IGHV1-45A0A0A0MS14 117 aa15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 DNASE2O00115 360 aaPredicted RBP15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 CCL21O00585 134 aa15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 PTTG1IPP53801 180 aa15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 HIST1H3AP68431 136 aa15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 PSG4Q00888 419 aa15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 GABRA6Q16445 453 aa15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 FAM214BQ7L5A3 538 aa15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 C1orf174Q8IYL3 243 aa15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 HARBI1Q96MB7 349 aa15.52■□□□□ 0.08
CNTNAP3-204ENST00000377656 MS4A18H0YCH9 400 aa15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 MS4A18Q3C1V0 323 aa15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 LYZL2Q7Z4W2 148 aa15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 HSD17B13Q7Z5P4 300 aaPredicted RBP15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 PDPNQ86YL7 162 aa15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 OR1B1Q8NGR6 318 aa15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 FAM210BQ96KR6 192 aa15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 PGLYRP3Q96LB9 341 aa15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 STARD6P59095 220 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms