RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 HSD17B11Q8NBQ5 300 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 LFNGQ8NES3 379 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 OR8G5Q8NG78 346 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 SNIP1Q8TAD8 396 aaKnown RBP10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 PLPPR1Q8TBJ4 325 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 HIST1H2AAQ96QV6 131 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 ARID1AO14497 2285 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 UMAD1C9J7I0 102 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNHIT1O43257 154 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 ADAM20O43506 726 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 PGLYRP1O75594 196 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 C1QL1O75973 258 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 WNT5AP41221 380 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 PPT1P50897 306 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF616Q08AN1 781 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 CXorf66Q5JRM2 361 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 SPIN3Q5JUX0 258 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 ZNF324BQ6AW86 544 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 C20orf204Q6ZNR8 217 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 NUFIP2Q7Z417 695 aaKnown RBP10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 MDS2Q8NDY4 140 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 PKIBQ9C010 78 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 SLC25A31Q9H0C2 315 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 HIPK2Q9H2X6 1198 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 BIN3Q9NQY0 253 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 CCL28Q9NRJ3 127 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 PLA2G3Q9NZ20 509 aa10.03□□□□□ -0.8
TNFRSF9-201ENST00000377507 TRAV24A0A0B4J272 114 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 ANKRD30BLA7E2S9 258 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 NPIPB11E5RHQ5 1161 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 SLC34A2O95436 690 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 PRH1P02810 166 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 SP1P08047 785 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 GNG3P63215 75 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 BAXQ07812 192 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 RNF212Q495C1 297 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 FREM1Q5H8C1 2179 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 TMEM164Q5U3C3 297 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 CMTM1Q8IZ96 169 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 TMEM171Q8WVE6 324 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 CABLES2Q9BTV7 478 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 ARRDC1-AS1Q9H2J1 176 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 OR51I2Q9H344 312 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 GP6Q9HCN6 339 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 RNF115Q9Y4L5 304 aa10.02□□□□□ -0.81
TNFRSF9-201ENST00000377507 PIGBOS1A0A0B4J2F0 54 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 LNP1A1A4G5 178 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 LILRA1O75019 489 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 TMEM50AO95807 157 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 IL18BPO95998 194 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 SLC25A6P12236 298 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 PRKACAP17612 351 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 ITGA3P26006 1051 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 ATP6V0CP27449 155 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 ETV3LQ6ZN32 361 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 H1FOOQ8IZA3 346 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 FAM58AQ8N1B3 248 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 BCL2L2Q92843 193 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 CLCC1Q96S66 551 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 PBDC1Q9BVG4 233 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 SLC35B3Q9H1N7 401 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 ESRP2Q9H6T0 727 aaKnown RBP10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 OR2W1Q9Y3N9 320 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 VPS13AQ96RL7 3174 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 C7orf77A4D0Y5 90 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 KIAA1324LA8MWY0 1029 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 HSD17B6O14756 317 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 CEACAM1P13688 526 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 CD59P13987 128 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 F2RP25116 425 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 ASCL1P50553 236 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 PAX9P55771 341 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 PLGLB1Q02325 96 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 TMEM182Q6ZP80 229 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 LINC00696Q6ZRV3 163 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 IQCF2Q8IXL9 164 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 ZFP62Q8NB50 900 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 SUMF1Q8NBK3 374 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 OR1K1Q8NGR3 316 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 IP6K3Q96PC2 410 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 EIF5A2Q9GZV4 153 aaKnown RBP10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 GLRX2Q9NS18 164 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 TREM2Q9NZC2 230 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 TAAR3PQ9P1P4 343 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 PRSS50Q9UI38 385 aa10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 KLF13Q9Y2Y9 288 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF9-201ENST00000377507 BTBD17A6NE02 478 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 KLRC4-KLRK1H3BQV0 150 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10□□□□□ -0.81
TNFRSF9-201ENST00000377507 J3QW42 95 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 HSPB6O14558 160 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 SSSCA1O60232 199 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 APLNRP35414 380 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 MEOX1P50221 254 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 VAMP2P63027 116 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 HLA-DRB3P79483 266 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 CLN3Q13286 438 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 HABP2Q14520 560 aaPredicted RBP10□□□□□ -0.81
TNFRSF9-201ENST00000377507 OR8G1Q15617 311 aa10□□□□□ -0.81
TNFRSF9-201ENST00000377507 AWAT1Q58HT5 328 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms