RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 TMEM42Q69YG0 159 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 LYZL2Q7Z4W2 148 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 C1orf87Q8N0U7 546 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 OR52M1Q8NGK5 317 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 OR4X1Q8NH49 305 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 TOMM40LQ969M1 308 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 ACTR3CQ9C0K3 210 aaPredicted RBP11.93□□□□□ -0.5
SF1-205ENST00000377394 CST2P09228 141 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 TDGF1P3P51864 188 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 B3GALT5-AS1P59052 145 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 CNN3Q15417 329 aaKnown RBP11.93□□□□□ -0.5
SF1-205ENST00000377394 HLA-BQ31612 363 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 TEX38Q6PEX7 206 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 BRICD5Q6PL45 260 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 PRR18Q8N4B5 295 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 SF3B5Q9BWJ5 86 aaKnown RBP11.93□□□□□ -0.5
SF1-205ENST00000377394 OPN3Q9H1Y3 402 aaPredicted RBP11.93□□□□□ -0.5
SF1-205ENST00000377394 OR6C6A6NF89 314 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 CBR3O75828 277 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 MMP9P14780 707 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 OMGP23515 440 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 ATP6V0CP27449 155 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 PIGYQ3MUY2 71 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 LRTM2Q8N967 370 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 RTN4IP1Q8WWV3 396 aaPredicted RBP11.93□□□□□ -0.5
SF1-205ENST00000377394 TMEM38BQ9NVV0 291 aa11.93□□□□□ -0.5
SF1-205ENST00000377394 SDK2Q58EX2 2172 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 LCATP04180 440 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 PATE4P0C8F1 98 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 PI4KAP42356 2102 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 COL10A1Q03692 680 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 RPS19BP1Q86WX3 136 aaKnown RBP11.92□□□□□ -0.5
SF1-205ENST00000377394 RCC1LQ96I51 464 aaKnown RBP11.92□□□□□ -0.5
SF1-205ENST00000377394 C18orf12Q96KH6 178 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 NSG1A0A0A6YYJ2 146 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 DLEU1O43261 78 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 ZNF32P17041 273 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 MLF1P58340 268 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 RAC3P60763 192 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 HLA-DRB3P79483 266 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 P2RY6Q15077 328 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 Q6ZPA2 131 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 LHFPL2Q6ZUX7 228 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 SLC35G3Q8N808 338 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 IFI44Q8TCB0 444 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 RNASEH2CQ8TDP1 164 aaKnown RBP11.92□□□□□ -0.5
SF1-205ENST00000377394 NAT6Q93015 286 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 BORCS8Q96FH0 119 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 WFIKKN1Q96NZ8 548 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 SYT3Q9BQG1 590 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 KIAA1549Q9HCM3 1950 aa11.92□□□□□ -0.5
SF1-205ENST00000377394 A0A0G2JMM0 328 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 A0A1W2PPB8 328 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 A0A1W2PRS3 328 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 KIR3DP1A8MWS1 328 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 M0R143 59 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 NRASP01111 189 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 CD55P08174 381 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 FXYD4P59646 89 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 ABCA11PQ4W5N1 156 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 WDR25Q64LD2 544 aaPredicted RBP11.91□□□□□ -0.5
SF1-205ENST00000377394 ARL6IP6Q8N6S5 226 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 AGBL5Q8NDL9 886 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 OR1P1Q8NH06 330 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 DTD1Q8TEA8 209 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 MSI2Q96DH6 328 aaKnown RBP11.91□□□□□ -0.5
SF1-205ENST00000377394 SLC2A9Q9NRM0 540 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 ZNF716A6NP11 495 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 DNPH1O43598 174 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 B4GALT1P15291 398 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 RAB4AP20338 218 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 NCR3LG1Q68D85 454 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 BTNL3Q6UXE8 466 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 FBXL14Q8N1E6 418 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 OSR2Q8N2R0 312 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 CPT1CQ8TCG5 803 aa11.91□□□□□ -0.5
SF1-205ENST00000377394 FAM24AA6NFZ4 105 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 GJE1A6NN92 205 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 CCL4P13236 92 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 NOVA1P51513 510 aaKnown RBP11.9□□□□□ -0.5
SF1-205ENST00000377394 PSG4Q00888 419 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 PAX5Q02548 391 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 PHLDA2Q53GA4 152 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 YRDCQ86U90 279 aaKnown RBP11.9□□□□□ -0.5
SF1-205ENST00000377394 GGNQ86UU5 652 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 FGFBP3Q8TAT2 258 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 R3HDM4Q96D70 268 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 ADGRG7Q96K78 797 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 ALKBH3Q96Q83 286 aaPredicted RBP11.9□□□□□ -0.5
SF1-205ENST00000377394 RIMS4Q9H426 269 aaPredicted RBP11.9□□□□□ -0.5
SF1-205ENST00000377394 SMDT1Q9H4I9 107 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 KIAA1456Q9P272 454 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 CNTRLQ7Z7A1 2325 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 RUNX1Q01196 453 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 DAZAP2Q15038 168 aaPredicted RBP11.9□□□□□ -0.5
SF1-205ENST00000377394 ABLIM2Q6H8Q1 611 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 SLC35E3Q7Z769 313 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 ZNF100Q8IYN0 542 aa11.9□□□□□ -0.5
SF1-205ENST00000377394 OR11L1Q8NGX0 322 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms