RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 RABAC1Q9UI14 185 aa11.9□□□□□ -0.51
GPC6-201ENST00000377047 PCDHGA9Q9Y5G4 932 aaKnown RBP11.9□□□□□ -0.51
GPC6-201ENST00000377047 C9orf172C9J069 976 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 G6PCP35575 357 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 MGAT2Q10469 447 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 GUK1Q16774 197 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 DUSP18Q8NEJ0 188 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 CHST5Q9GZS9 411 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 HILPDAQ9Y5L2 63 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 ERVFRD-1P60508 538 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 KCNMB1Q16558 191 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 RPS4Y2Q8TD47 263 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 Q8WTZ3 238 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 A0A1W2PQM1 296 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 RNASEK-C17orf49H0YIS7 233 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 GREM1O60565 184 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 C10orf111Q8N326 155 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 ZPLD1Q8TCW7 415 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 SLC7A10Q9NS82 523 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 MIA3Q5JRA6 1907 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 CLEC9AQ6UXN8 241 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 TCTE3Q8IZS6 198 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 LINC00052Q96N35 136 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 ARFGEF1Q9Y6D6 1849 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 GSTZ1O43708 216 aaPredicted RBP11.89□□□□□ -0.51
GPC6-201ENST00000377047 PPYP01298 95 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 CD200P41217 278 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 ZP4Q12836 540 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 ADAT3Q96EY9 351 aaPredicted RBP11.89□□□□□ -0.51
GPC6-201ENST00000377047 MS4A3Q96HJ5 214 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 UFC1Q9Y3C8 167 aa11.89□□□□□ -0.51
GPC6-201ENST00000377047 IGHV3-21A0A0B4J1V1 117 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 PRSS44E7EML9 344 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 DLL1O00548 723 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 CLDN14O95500 239 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 COX6A1P12074 109 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 GZMKP49863 264 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 KRTDAPP60985 99 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 LSM11P83369 360 aaKnown RBP eCLIP11.88□□□□□ -0.51
GPC6-201ENST00000377047 RBPMS2Q6ZRY4 209 aaKnown RBP11.88□□□□□ -0.51
GPC6-201ENST00000377047 DTD1Q8TEA8 209 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 ZNF714Q96N38 554 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 TGIF2Q9GZN2 237 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 PRNDQ9UKY0 176 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 YTHDF2Q9Y5A9 579 aaKnown RBP11.88□□□□□ -0.51
GPC6-201ENST00000377047 LNP1A1A4G5 178 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 ATP6V1G2-DDX39BF2Z307 99 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 MPC2O95563 127 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 LILRB1Q8NHL6 650 aaPredicted RBP11.88□□□□□ -0.51
GPC6-201ENST00000377047 PIMREGQ9BSJ6 248 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 TMPRSS5Q9H3S3 457 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 IL17BQ9UHF5 180 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 LOC101059948A0A1B0GTJ6 334 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 OR4C45A6NMZ5 311 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 SYNGR2O43760 224 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 ADAP1O75689 374 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 NGFRP08138 427 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 Q1RN00 199 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 OR4D10Q8NGI6 311 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 TRAPPC1Q9Y5R8 145 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 TGOLN2O43493 480 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 ICMTO60725 284 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 PTTG1IPP53801 180 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 TEX30Q5JUR7 227 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 C1orf174Q8IYL3 243 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 WNT2BQ93097 391 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 NOL4LQ96MY1 436 aaPredicted RBP11.88□□□□□ -0.51
GPC6-201ENST00000377047 RNF2Q99496 336 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 NUDT16L1Q9BRJ7 211 aaKnown RBP11.88□□□□□ -0.51
GPC6-201ENST00000377047 PPP1CCP36873 323 aaKnown RBP11.88□□□□□ -0.51
GPC6-201ENST00000377047 OR1L1Q8NH94 360 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 ABHD1Q96SE0 405 aa11.88□□□□□ -0.51
GPC6-201ENST00000377047 SF3B6Q9Y3B4 125 aaKnown RBP11.88□□□□□ -0.51
GPC6-201ENST00000377047 SYNGR1O43759 233 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 CSRP2Q16527 193 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 ZNF658BQ4V348 819 aaPredicted RBP11.87□□□□□ -0.51
GPC6-201ENST00000377047 FAM27BQ5VT28 67 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 OR2W1Q9Y3N9 320 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 GATCO43716 136 aaKnown RBP11.87□□□□□ -0.51
GPC6-201ENST00000377047 INHBBP09529 407 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 PAFAH1B2P68402 229 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 TMEM88Q6PEY1 159 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 TPRX1Q8N7U7 411 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 ITLN1Q8WWA0 313 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 P2RX4Q99571 388 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 ATP5SQ99766 215 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 TRAV8-7A0A075B6U6 113 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 KLRB1Q12918 225 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 PRSS54Q6PEW0 395 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 OR4A4PQ8NGN8 299 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 MRGPRFQ96AM1 343 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 FBXL17Q9UF56 701 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 TRBV5-3A0A0A0MS03 114 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 NPIPB8E9PQR5 432 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 CHST1O43916 411 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 RPS4Y1P22090 263 aaKnown RBP11.87□□□□□ -0.51
GPC6-201ENST00000377047 ZNF519Q8TB69 540 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 SSMEM1Q8WWF3 244 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 CPN1P15169 458 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms