RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 CCL1P22362 96 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 RAB11AP62491 216 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 COL10A1Q03692 680 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 TLE3Q04726 772 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 MFAP5Q13361 173 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 LGI3Q8N145 548 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 SLC35G3Q8N808 338 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 OR2Y1Q8NGV0 311 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 OR1P1Q8NH06 330 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 LOC102723971A0A1B0GUV8 181 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 CA11O75493 328 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 CYB5R3P00387 301 aaPredicted RBP11.15□□□□□ -0.62
MSH5-204ENST00000375755 TCN2P20062 427 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 ALDH3B1P43353 468 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 H3F3AP84243 136 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 TAF9Q16594 264 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 DOK3Q7L591 496 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 DTX1Q86Y01 620 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 OR2M3Q8NG83 312 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 DTD1Q8TEA8 209 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 FAAP24Q9BTP7 215 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 CABLES2Q9BTV7 478 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 FOXJ2Q9P0K8 574 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 DKKL1Q9UK85 242 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 CBY1Q9Y3M2 126 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 PCNX2A6NKB5 2137 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 NKX2-6A6NCS4 301 aa11.15□□□□□ -0.63
MSH5-204ENST00000375755 PHF1O43189 567 aaPredicted RBP11.15□□□□□ -0.63
MSH5-204ENST00000375755 FCGR2AP12318 317 aa11.15□□□□□ -0.63
MSH5-204ENST00000375755 MYBPHQ13203 477 aa11.15□□□□□ -0.63
MSH5-204ENST00000375755 MEX3BQ6ZN04 569 aaKnown RBP11.15□□□□□ -0.63
MSH5-204ENST00000375755 OR5C1Q8NGR4 320 aa11.15□□□□□ -0.63
MSH5-204ENST00000375755 OR2AJ1Q8NGZ0 328 aa11.15□□□□□ -0.63
MSH5-204ENST00000375755 TMEM234Q8WY98 164 aa11.15□□□□□ -0.63
MSH5-204ENST00000375755 PROK2Q9HC23 129 aa11.15□□□□□ -0.63
MSH5-204ENST00000375755 TMEM242Q9NWH2 141 aa11.15□□□□□ -0.63
MSH5-204ENST00000375755 A0A0G2JMM0 328 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 A0A1W2PPB8 328 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 A0A1W2PRS3 328 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 KIR3DP1A8MWS1 328 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 PROB1E7EW31 1015 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 HSPA12AO43301 675 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 CST7O76096 145 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 PGA3P0DJD8 388 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 ZNF41P51814 821 aaPredicted RBP11.14□□□□□ -0.63
MSH5-204ENST00000375755 PPA1Q15181 289 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 PLA2G2CQ5R387 149 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 ODF3L1Q8IXM7 274 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 TMEM252Q8N6L7 170 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 ST8SIA1Q92185 356 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 RBMXL1Q96E39 390 aaKnown RBP11.14□□□□□ -0.63
MSH5-204ENST00000375755 MAGT1Q9H0U3 335 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 CHST11Q9NPF2 352 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 ZNF732B4DXR9 585 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 OR4A8P0C604 315 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 DYNLT3P51808 116 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 DCAF12Q5T6F0 453 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 SLC16A14Q7RTX9 510 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 CMTM1Q8IZ96 169 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 ZNF283Q8N7M2 679 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 CT55Q8WUE5 264 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 DYRK2Q92630 601 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 PIGTQ969N2 578 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 LYZL4Q96KX0 146 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 NECAP2Q9NVZ3 263 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 KLHL13Q9P2N7 655 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 GNG13Q9P2W3 67 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 SHANK1Q9Y566 2161 aa11.14□□□□□ -0.63
MSH5-204ENST00000375755 C9orf172C9J069 976 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 DFFBO76075 338 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 CD55P08174 381 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 MMP9P14780 707 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 FOLR3P41439 243 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 ARL6IP1Q15041 203 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 TMEM217Q8N7C4 229 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 OR10A7Q8NGE5 316 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 TP53RKQ96S44 253 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 PNRC2Q9NPJ4 139 aaKnown RBP11.13□□□□□ -0.63
MSH5-204ENST00000375755 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 SSSCA1O60232 199 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 GNG10P50151 68 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 GABREP78334 506 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 P2RY6Q15077 328 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 RTL6Q6ICC9 239 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 DHRS13Q6UX07 377 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 PPP1R32Q7Z5V6 425 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 OR10G4Q8NGN3 311 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 SYT3Q9BQG1 590 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 MRPL13Q9BYD1 178 aaKnown RBP11.13□□□□□ -0.63
MSH5-204ENST00000375755 PLEKHF2Q9H8W4 249 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 MED13Q9UHV7 2174 aa11.13□□□□□ -0.63
MSH5-204ENST00000375755 LIPT2A6NK58 231 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 GCGP01275 180 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 OPN1MWP04001 364 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 OPN1MW2P0DN77 364 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 OPN1MW3P0DN78 364 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 FAHP16930 419 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 RAB35Q15286 201 aa11.12□□□□□ -0.63
MSH5-204ENST00000375755 WDR25Q64LD2 544 aaPredicted RBP11.12□□□□□ -0.63
MSH5-204ENST00000375755 NOXO1Q8NFA2 376 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms