RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 OR1F12Q8NHA8 337 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 SPSB1Q96BD6 273 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 SYT3Q9BQG1 590 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 TCEAL7Q9BRU2 100 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 SH2D2AQ9NP31 389 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 OTOGLQ3ZCN5 2332 aa13.04□□□□□ -0.32
MSH5-203ENST00000375750 RAB5CP51148 216 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 Q6ZSR3 168 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 FOXL2NBQ6ZUU3 175 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 SLC25A26Q70HW3 274 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 YRDCQ86U90 279 aaKnown RBP13.03□□□□□ -0.32
MSH5-203ENST00000375750 ZNF695Q8IW36 515 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 OR14L1PQ8NHC6 308 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 RHOVQ96L33 236 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 A0A0G2JMM0 328 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 A0A1W2PPB8 328 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 A0A1W2PRS3 328 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 KIR3DP1A8MWS1 328 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 RAB2AP61019 212 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 PSG4Q00888 419 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 TLE1Q04724 770 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 MALLQ13021 153 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 C4orf17Q53FE4 359 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 HIKESHIQ53FT3 197 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 FAM27BQ5VT28 67 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 SELENOHQ8IZQ5 122 aaKnown RBP13.03□□□□□ -0.32
MSH5-203ENST00000375750 GAPTQ8N292 157 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 KDF1Q8NAX2 398 aaPredicted RBP13.03□□□□□ -0.32
MSH5-203ENST00000375750 DEFB124Q8NES8 71 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 CALHM2Q9HA72 323 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 DKKL1Q9UK85 242 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 CNN3Q15417 329 aaKnown RBP13.03□□□□□ -0.32
MSH5-203ENST00000375750 OR10D4PQ8NGN7 298 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 TMEM222Q9H0R3 208 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 TMED3Q9Y3Q3 217 aa13.03□□□□□ -0.32
MSH5-203ENST00000375750 CYB5BO43169 146 aa13.02□□□□□ -0.32
MSH5-203ENST00000375750 PDCD6O75340 191 aa13.02□□□□□ -0.32
MSH5-203ENST00000375750 TRGC2P03986 189 aa13.02□□□□□ -0.32
MSH5-203ENST00000375750 CCL2P13500 99 aa13.02□□□□□ -0.32
MSH5-203ENST00000375750 TSC22D1Q15714 1073 aa13.02□□□□□ -0.32
MSH5-203ENST00000375750 PFDN5Q99471 154 aa13.02□□□□□ -0.32
MSH5-203ENST00000375750 FAM86C1Q9NVL1 165 aa13.02□□□□□ -0.32
MSH5-203ENST00000375750 CHST1O43916 411 aa13.02□□□□□ -0.33
MSH5-203ENST00000375750 SCAF4O95104 1147 aaKnown RBP13.02□□□□□ -0.33
MSH5-203ENST00000375750 LIFP15018 202 aa13.02□□□□□ -0.33
MSH5-203ENST00000375750 RAB1AP62820 205 aa13.02□□□□□ -0.33
MSH5-203ENST00000375750 EIF3IQ13347 325 aaKnown RBP13.02□□□□□ -0.33
MSH5-203ENST00000375750 IGFBP7Q16270 282 aa13.02□□□□□ -0.33
MSH5-203ENST00000375750 C9orf135Q5VTT2 229 aa13.02□□□□□ -0.33
MSH5-203ENST00000375750 GPR61Q9BZJ8 451 aa13.02□□□□□ -0.33
MSH5-203ENST00000375750 CCL28Q9NRJ3 127 aa13.02□□□□□ -0.33
MSH5-203ENST00000375750 IL17BQ9UHF5 180 aa13.02□□□□□ -0.33
MSH5-203ENST00000375750 FREM1Q5H8C1 2179 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 A0A0G2JRQ6 117 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST1H2BKO60814 126 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST1H2BJP06899 126 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 SOD3P08294 240 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST1H2BOP23527 126 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST1H2BBP33778 126 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 RBM11P57052 281 aaKnown RBP13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST1H2BDP58876 126 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST1H2BCP62807 126 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 VAMP2P63027 116 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 MRPS34P82930 218 aaKnown RBP13.01□□□□□ -0.33
MSH5-203ENST00000375750 RAB35Q15286 201 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST2H2BEQ16778 126 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.01□□□□□ -0.33
MSH5-203ENST00000375750 FAM180AQ6UWF9 173 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 ZNF611Q8N823 705 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 PSMF1Q92530 271 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST1H2BHQ93079 126 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 THOC3Q96J01 351 aaKnown RBP13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST1H2BNQ99877 126 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 HIST1H2BMQ99879 126 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 SPAARA0A1B0GVQ0 90 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 HLA-HP01893 362 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 BCL3P20749 454 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 CCNOP22674 350 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 TMEM267Q0VDI3 215 aaPredicted RBP13.01□□□□□ -0.33
MSH5-203ENST00000375750 HNF4GQ14541 408 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 ASCL4Q6XD76 172 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 LHFPL2Q6ZUX7 228 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 DPPA2Q7Z7J5 298 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 PIP4P1Q86T03 277 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 CCDC71LQ8N9Z2 235 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 PLPPR1Q8TBJ4 325 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 PLEKHF2Q9H8W4 249 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 WSB1Q9Y6I7 421 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 ARHGAP21Q5T5U3 1957 aa13.01□□□□□ -0.33
MSH5-203ENST00000375750 DIDO1Q9BTC0 2240 aaKnown RBP13□□□□□ -0.33
MSH5-203ENST00000375750 PITX3O75364 302 aa13□□□□□ -0.33
MSH5-203ENST00000375750 SERPINA7P05543 415 aa13□□□□□ -0.33
MSH5-203ENST00000375750 EDN3P14138 238 aa13□□□□□ -0.33
MSH5-203ENST00000375750 MAS1LP35410 378 aa13□□□□□ -0.33
MSH5-203ENST00000375750 CDX1P47902 265 aaPredicted RBP13□□□□□ -0.33
MSH5-203ENST00000375750 TCF15Q12870 199 aa13□□□□□ -0.33
MSH5-203ENST00000375750 HERPUD1Q15011 391 aa13□□□□□ -0.33
MSH5-203ENST00000375750 ZNF100Q8IYN0 542 aa13□□□□□ -0.33
MSH5-203ENST00000375750 LFNGQ8NES3 379 aa13□□□□□ -0.33
MSH5-203ENST00000375750 EXTL1Q92935 676 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms