RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 MAP1LC3CQ9BXW4 147 aa9□□□□□ -0.97
CD28-202ENST00000374481 OR2D2Q9H210 308 aa9□□□□□ -0.97
CD28-202ENST00000374481 TMEM242Q9NWH2 141 aa9□□□□□ -0.97
CD28-202ENST00000374481 FSTP19883 344 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 UBE2G1P62253 170 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 RUNX2Q13950 521 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 C1orf100Q5SVJ3 147 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 OR52M1Q8NGK5 317 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 C11orf40Q8WZ69 217 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 CUTCQ9NTM9 273 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 QSER1Q2KHR3 1735 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 NDUFB4O95168 129 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 MPZL1O95297 269 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 ZIC2O95409 532 aaPredicted RBP8.99□□□□□ -0.97
CD28-202ENST00000374481 KIAA1644Q3SXP7 199 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 FA2HQ7L5A8 372 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 TBC1D26Q86UD7 250 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 OR5D13Q8NGL4 314 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 SLC25A43Q8WUT9 341 aaPredicted RBP8.99□□□□□ -0.97
CD28-202ENST00000374481 LOXL4Q96JB6 756 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 TPPP3Q9BW30 176 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 TAF1LQ8IZX4 1826 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 KLF4O43474 513 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 SPRY1O43609 319 aaPredicted RBP8.99□□□□□ -0.97
CD28-202ENST00000374481 SERF1AO75920 110 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 EPPINO95925 133 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 CA2P00918 260 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 APCSP02743 223 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 SHBQ15464 509 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 ZNF776Q68DI1 518 aaPredicted RBP8.99□□□□□ -0.97
CD28-202ENST00000374481 KMT5CQ86Y97 462 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 WDFY1Q8IWB7 410 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 OR2I1PQ8NGU4 316 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 OR4A16Q8NH70 328 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 ZNRF4Q8WWF5 429 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 PP6455Q8WZ26 134 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 TSACCQ96A04 125 aaPredicted RBP8.99□□□□□ -0.97
CD28-202ENST00000374481 BOD1Q96IK1 185 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 SIGMAR1Q99720 223 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 ABHD14AQ9BUJ0 271 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 ULBP2Q9BZM5 246 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 RPRMQ9NS64 109 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 LIN7CQ9NUP9 197 aaKnown RBP8.99□□□□□ -0.97
CD28-202ENST00000374481 POLR3KQ9Y2Y1 108 aaPredicted RBP8.99□□□□□ -0.97
CD28-202ENST00000374481 SLX4Q8IY92 1834 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 TMEM238C9JI98 176 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 TMEM250H0YL14 139 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 PRKNO60260 465 aaPredicted RBP8.99□□□□□ -0.97
CD28-202ENST00000374481 NKX2-2O95096 273 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 VAMP5O95183 116 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 TNFP01375 233 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 MPLP40238 635 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 SLC35B1P78383 322 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 HYAL1Q12794 435 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 OSR2Q8N2R0 312 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 MRGPRX3Q96LB0 322 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 HSPB8Q9UJY1 196 aa8.99□□□□□ -0.97
CD28-202ENST00000374481 M0QZ24 198 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 CD160O95971 181 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 ZNF735P0CB33 412 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 HIST1H1EP10412 219 aaKnown RBP8.98□□□□□ -0.97
CD28-202ENST00000374481 CD33P20138 364 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 HTR1DP28221 377 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 FUT7Q11130 342 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 C2orf27AQ580R0 203 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 DEFB123Q8N688 67 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 LIPHQ8WWY8 451 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 TNFRSF14Q92956 283 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 TMEM147Q9BVK8 224 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 CST9LQ9H4G1 147 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 A0A0J9YY10 115 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 CRYM-AS1A6NIL9 109 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 SLC22A20A6NK97 555 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 K7EQM0 130 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 K7N7A8 449 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 AMMECR1LQ6DCA0 310 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 RNASE8Q8TDE3 154 aaKnown RBP8.98□□□□□ -0.97
CD28-202ENST00000374481 VOPP1Q96AW1 172 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 OR4C12Q96R67 309 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 GFI1Q99684 422 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 SDK1Q7Z5N4 2213 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 J3QRE1 110 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 CER1O95813 267 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 IL9P15248 144 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 EPHA8P29322 1005 aaPredicted RBP8.98□□□□□ -0.97
CD28-202ENST00000374481 CEACAM8P31997 349 aaPredicted RBP8.98□□□□□ -0.97
CD28-202ENST00000374481 HNRNPA1L2Q32P51 320 aaKnown RBP8.98□□□□□ -0.97
CD28-202ENST00000374481 SMIM21Q3B7S5 101 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 CXorf66Q5JRM2 361 aaPredicted RBP8.98□□□□□ -0.97
CD28-202ENST00000374481 IMMP2LQ96T52 175 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 TECRQ9NZ01 308 aaKnown RBP8.98□□□□□ -0.97
CD28-202ENST00000374481 CACNA1IQ9P0X4 2223 aa8.98□□□□□ -0.97
CD28-202ENST00000374481 S1PR2O95136 353 aa8.97□□□□□ -0.97
CD28-202ENST00000374481 SRIP30626 198 aa8.97□□□□□ -0.97
CD28-202ENST00000374481 OTX1P32242 354 aaPredicted RBP8.97□□□□□ -0.97
CD28-202ENST00000374481 CLDN17P56750 224 aa8.97□□□□□ -0.97
CD28-202ENST00000374481 SRSF4Q08170 494 aaKnown RBP8.97□□□□□ -0.97
CD28-202ENST00000374481 MGAT2Q10469 447 aa8.97□□□□□ -0.97
CD28-202ENST00000374481 EIF4EBP2Q13542 120 aaPredicted RBP8.97□□□□□ -0.97
CD28-202ENST00000374481 PDCD1Q15116 288 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms