RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 POM121CA8CG34 1229 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 A8MXK9 166 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 H7C1Q1 480 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 SLC33A1O00400 549 aaPredicted RBP21.15■□□□□ 0.98
CTSA-203ENST00000372459 DIRAS3O95661 229 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 NKX6-1P78426 367 aaPredicted RBP21.15■□□□□ 0.98
CTSA-203ENST00000372459 LRRC37A5PQ49AS3 106 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 SHEQ5VZ18 495 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 ZNF880Q6PDB4 577 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 HSD17B13Q7Z5P4 300 aaPredicted RBP21.15■□□□□ 0.98
CTSA-203ENST00000372459 ZNF546Q86UE3 836 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 ZGRF1Q86YA3 2104 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 PDZD9Q8IXQ8 264 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 KCNIP3Q9Y2W7 256 aa21.15■□□□□ 0.98
CTSA-203ENST00000372459 KRBOX1C9JBD0 128 aa21.14■□□□□ 0.98
CTSA-203ENST00000372459 BET1O15155 118 aa21.14■□□□□ 0.98
CTSA-203ENST00000372459 PRAMEF6Q5VXH4 476 aa21.14■□□□□ 0.98
CTSA-203ENST00000372459 C20orf204Q6ZNR8 217 aa21.14■□□□□ 0.98
CTSA-203ENST00000372459 GALNT11Q8NCW6 608 aa21.14■□□□□ 0.98
CTSA-203ENST00000372459 METTL8Q9H825 291 aaKnown RBP21.14■□□□□ 0.98
CTSA-203ENST00000372459 GLS2Q9UI32 602 aa21.14■□□□□ 0.98
CTSA-203ENST00000372459 DSPP15924 2871 aaKnown RBP21.14■□□□□ 0.97
CTSA-203ENST00000372459 C16orf97H3BN30 126 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 ADAP1O75689 374 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 OR2F2O95006 317 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 IGHV3-13P01766 116 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 NUP62P37198 522 aaPredicted RBP21.14■□□□□ 0.97
CTSA-203ENST00000372459 OR2F1Q13607 317 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 MSMPQ1L6U9 139 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 ZNF826PQ6ZT77 177 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 KCNRGQ8N5I3 272 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 EIF4E3Q8N5X7 224 aaKnown RBP21.14■□□□□ 0.97
CTSA-203ENST00000372459 OR1S1Q8NH92 325 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 RTN4IP1Q8WWV3 396 aaPredicted RBP21.14■□□□□ 0.97
CTSA-203ENST00000372459 SYT3Q9BQG1 590 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 RSRP1Q9BUV0 290 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 SLC25A32Q9H2D1 315 aa21.14■□□□□ 0.97
CTSA-203ENST00000372459 FGF2P09038 288 aa21.13■□□□□ 0.97
CTSA-203ENST00000372459 CCKARP32238 428 aa21.13■□□□□ 0.97
CTSA-203ENST00000372459 RPS23P62266 143 aaKnown RBP21.13■□□□□ 0.97
CTSA-203ENST00000372459 HERPUD1Q15011 391 aa21.13■□□□□ 0.97
CTSA-203ENST00000372459 WDR82Q6UXN9 313 aa21.13■□□□□ 0.97
CTSA-203ENST00000372459 LINC00052Q96N35 136 aa21.13■□□□□ 0.97
CTSA-203ENST00000372459 NAA60Q9H7X0 242 aa21.13■□□□□ 0.97
CTSA-203ENST00000372459 SLC2A9Q9NRM0 540 aa21.13■□□□□ 0.97
CTSA-203ENST00000372459 RASL12Q9NYN1 266 aa21.13■□□□□ 0.97
CTSA-203ENST00000372459 TNFSF18Q9UNG2 199 aa21.13■□□□□ 0.97
CTSA-203ENST00000372459 A0A1B0GW55 424 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 HAND1O96004 215 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 DUX4L2P0CJ85 424 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 DUX4L3P0CJ86 424 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 DUX4L4P0CJ87 422 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 DUX4L5P0CJ88 424 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 DUX4L6P0CJ89 424 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 DUX4L7P0CJ90 424 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 KLF3P57682 345 aaPredicted RBP21.12■□□□□ 0.97
CTSA-203ENST00000372459 LRP11Q86VZ4 500 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 OR2Z1Q8NG97 314 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 JKAMPQ9P055 326 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 DUX4Q9UBX2 424 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 HLA-DRB3P79483 266 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 MOB1BQ7L9L4 216 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 CCDC71LQ8N9Z2 235 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 RELL2Q8NC24 303 aaPredicted RBP21.12■□□□□ 0.97
CTSA-203ENST00000372459 OR4A4PQ8NGN8 299 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 THAP6Q8TBB0 222 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 ST8SIA2Q92186 375 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 GALNT14Q96FL9 552 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 UFSP2Q9NUQ7 469 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 OR14J1Q9UGF5 321 aa21.12■□□□□ 0.97
CTSA-203ENST00000372459 ATP6V1G2-DDX39BF2Z307 99 aa21.11■□□□□ 0.97
CTSA-203ENST00000372459 SPDEFO95238 335 aa21.11■□□□□ 0.97
CTSA-203ENST00000372459 RLN2P04090 185 aa21.11■□□□□ 0.97
CTSA-203ENST00000372459 PSMB6P28072 239 aa21.11■□□□□ 0.97
CTSA-203ENST00000372459 PHLDA2Q53GA4 152 aa21.11■□□□□ 0.97
CTSA-203ENST00000372459 ZNF497Q6ZNH5 498 aa21.11■□□□□ 0.97
CTSA-203ENST00000372459 C22orf34Q6ZV56 151 aa21.11■□□□□ 0.97
CTSA-203ENST00000372459 C5orf24Q7Z6I8 188 aa21.11■□□□□ 0.97
CTSA-203ENST00000372459 VRK1Q99986 396 aaPredicted RBP21.11■□□□□ 0.97
CTSA-203ENST00000372459 PCDHB10Q9UN67 800 aa21.11■□□□□ 0.97
CTSA-203ENST00000372459 RCC1P18754 421 aaPredicted RBP21.1■□□□□ 0.97
CTSA-203ENST00000372459 CD40P25942 277 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 CD200P41217 278 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 VHLLQ6RSH7 139 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 ACP7Q6ZNF0 438 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 BVESQ8NE79 360 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 PLPPR1Q8TBJ4 325 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 TMEM171Q8WVE6 324 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 SHANK1Q9Y566 2161 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 IGKV1-6A0A0C4DH72 117 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 C1QTNF9BB2RNN3 333 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 WNT9BO14905 357 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 TUSC2O75896 110 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 HOXB5P09067 269 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 GAPTQ8N292 157 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 C2orf50Q96LR7 162 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 SUCNR1Q9BXA5 334 aa21.1■□□□□ 0.97
CTSA-203ENST00000372459 IGLV3-9A0A075B6K5 115 aa21.09■□□□□ 0.97
CTSA-203ENST00000372459 KANTRA0A1W2PQU2 76 aa21.09■□□□□ 0.97
CTSA-203ENST00000372459 BCL2L11O43521 198 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms