RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 MED30Q96HR3 178 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 THYN1Q9P016 225 aa8.59□□□□□ -1.03
COL4A6-202ENST00000372216 ZNFX1Q9P2E3 1918 aaKnown RBP8.59□□□□□ -1.03
COL4A6-202ENST00000372216 C3orf85A0A1B0GTC6 90 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 PYCARD-AS1I3L0S3 204 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 CSF2RBP32927 897 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 CRYBB2P43320 205 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 PLPPR5Q32ZL2 321 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 ARRDC1Q8N5I2 433 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 LILRB4Q8NHJ6 448 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 DUX5Q96PT3 197 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 SRD5A3Q9H8P0 318 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 IGKV1-8A0A0C4DH67 115 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 ATP6V1G2-DDX39BF2Z307 99 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 CDIPTO14735 213 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 LALBAP00709 142 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 ANGPTL6Q8NI99 470 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 ADIPOR1Q96A54 375 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 RAB33BQ9H082 229 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 C1QBP02746 253 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 GALR1P47211 349 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 GZMKP49863 264 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 GTF2H5Q6ZYL4 71 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 LINC00469Q8N7U9 141 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 SSMEM1Q8WWF3 244 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 DNASE2BQ8WZ79 361 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF665Q9H7R5 613 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 FKBP11Q9NYL4 201 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 NAT8BQ9UHF3 227 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 PILRAQ9UKJ1 303 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 CCL27Q9Y4X3 112 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 SLC38A11Q08AI6 406 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 LINC00299Q6ZSB3 139 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 PIMREGQ9BSJ6 248 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
COL4A6-202ENST00000372216 CACNG5Q9UF02 275 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 OOEPA6NGQ2 149 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 MMDQ15546 238 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 LGALSLQ3ZCW2 172 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-202ENST00000372216 TEX261Q6UWH6 196 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 PRNTQ86SH4 94 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 OR4B1Q8NGF8 309 aa8.58□□□□□ -1.04
COL4A6-202ENST00000372216 TEX50A0A1B0GTY4 177 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 FFAR1O14842 300 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 SCGB1D4Q6XE38 83 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 PDPNQ86YL7 162 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 TMEM251Q8N6I4 163 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF519Q8TB69 540 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 HGDQ93099 445 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 HELTA6NFD8 242 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 ATP5J2P56134 94 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 TGIF1Q15583 401 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF552Q9H707 407 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-202ENST00000372216 CLN8Q9UBY8 286 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 MIA3Q5JRA6 1907 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 IGHV3-23P01764 117 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 ERVS71-1P61550 626 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 MRPS11P82912 194 aaKnown RBP8.57□□□□□ -1.04
COL4A6-202ENST00000372216 TSPO2Q5TGU0 170 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 PPP1R1CQ8WVI7 109 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 PLXNA1Q9UIW2 1896 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 IL11P20809 199 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 RPEL1Q2QD12 228 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 AMMECR1LQ6DCA0 310 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 SLC16A12Q6ZSM3 486 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 C16orf82Q7Z2V1 217 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 CENPVQ7Z7K6 275 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-202ENST00000372216 CADM3Q8N126 398 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 ZNF385AQ96PM9 386 aaKnown RBP8.57□□□□□ -1.04
COL4A6-202ENST00000372216 GSTZ1O43708 216 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-202ENST00000372216 ID1P41134 155 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 HNRNPA3P51991 378 aaKnown RBP8.57□□□□□ -1.04
COL4A6-202ENST00000372216 CD81P60033 236 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 AESQ08117 197 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 C19orf54Q5BKX5 351 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 Q6ZNX1 250 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 MS4A5Q9H3V2 200 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 FOXJ2Q9P0K8 574 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 PHOX2AO14813 284 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 PPP1CCP36873 323 aaKnown RBP8.57□□□□□ -1.04
COL4A6-202ENST00000372216 ZBTB37Q5TC79 503 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 ZDHHC22Q8N966 263 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 WDR89Q96FK6 387 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-202ENST00000372216 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-202ENST00000372216 FRRS1LQ9P0K9 344 aa8.57□□□□□ -1.04
COL4A6-202ENST00000372216 SLC25A10Q9UBX3 287 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-202ENST00000372216 GALP22466 123 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 OVCH2Q7RTZ1 564 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 TPRX1Q8N7U7 411 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 OR1K1Q8NGR3 316 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 AKIP1Q9NQ31 210 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 RNF24Q9Y225 148 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 TRDCB7Z8K6 153 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 HOXD4P09016 255 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-202ENST00000372216 HIST1H3AP68431 136 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 TWIST1Q15672 202 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 OR8A1Q8NGG7 326 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 OR1L1Q8NH94 360 aa8.56□□□□□ -1.04
COL4A6-202ENST00000372216 NEIL1Q96FI4 390 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-202ENST00000372216 TO15178 435 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms