RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 KISS1Q15726 138 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 ZSCAN26Q16670 478 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 ZIK1Q3SY52 487 aaPredicted RBP8.18□□□□□ -1.1
CLRN3-201ENST00000368671 ZNF691Q5VV52 312 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 OR2W3Q7Z3T1 314 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 SLC35E3Q7Z769 313 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 THNSL2Q86YJ6 484 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 ACBD7Q8N6N7 88 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 ZNF565Q8N9K5 539 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 OR51T1Q8NGJ9 327 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 RFESDQ8TAC1 157 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 MRGPRDQ8TDS7 321 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 CHPT1Q8WUD6 406 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 TSEN15Q8WW01 171 aaKnown RBP8.18□□□□□ -1.1
CLRN3-201ENST00000368671 CENPNQ96H22 339 aaPredicted RBP8.18□□□□□ -1.1
CLRN3-201ENST00000368671 DUX3Q96PT4 197 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 MCRIP2Q9BUT9 160 aaKnown RBP8.18□□□□□ -1.1
CLRN3-201ENST00000368671 AASSQ9UDR5 926 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 PSG11Q9UQ72 335 aa8.18□□□□□ -1.1
CLRN3-201ENST00000368671 TRAV39A0A0B4J263 110 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 A0A1W2PPE3 182 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 IL1AP01583 271 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 CGB3P0DN86 165 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 CGB7P0DN87 165 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 SSTR5P35346 364 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 MYCNOSP40205 109 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 RAB7AP51149 207 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 RAB25P57735 213 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 SLC35B1P78383 322 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 MADCAM1Q13477 382 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 MEDAGQ5VYS4 303 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 LHFPL3Q86UP9 236 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 SATL1Q86VE3 508 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 SERPINA12Q8IW75 414 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 FOXRED2Q8IWF2 684 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 OR5D14Q8NGL3 314 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 OR10K1Q8NGX5 313 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 CNIH3Q8TBE1 160 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 PLPPR1Q8TBJ4 325 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 TNFAIP8L1Q8WVP5 186 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 TRUB1Q8WWH5 349 aaKnown RBP8.17□□□□□ -1.1
CLRN3-201ENST00000368671 MRPL48Q96GC5 212 aaKnown RBP8.17□□□□□ -1.1
CLRN3-201ENST00000368671 GPER1Q99527 375 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 B9D2Q9BPU9 175 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 ALG8Q9BVK2 526 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 BARHL1Q9BZE3 327 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 FAM192AQ9GZU8 254 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 ISG20L2Q9H9L3 353 aaKnown RBP8.17□□□□□ -1.1
CLRN3-201ENST00000368671 ZFP57Q9NU63 452 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 DHDHQ9UQ10 334 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 EXOGQ9Y2C4 368 aaKnown RBP8.17□□□□□ -1.1
CLRN3-201ENST00000368671 ORC6Q9Y5N6 252 aa8.17□□□□□ -1.1
CLRN3-201ENST00000368671 IGHV3-72A0A0B4J1Y9 119 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 TRAV24A0A0B4J272 114 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 GABRPO00591 440 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 MAGEB3O15480 346 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 FGF16O43320 207 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 HTR3BO95264 441 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 REG1BP48304 166 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 RASSF2P50749 326 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 GALEQ14376 348 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 IL13RA2Q14627 380 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 PIGYQ3MUY2 71 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 KIAA2026Q5HYC2 2103 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 RSBN1Q5VWQ0 802 aaPredicted RBP8.16□□□□□ -1.1
CLRN3-201ENST00000368671 UNQ9370/PRO34162Q6UXP9 181 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 MOB3BQ86TA1 216 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 OR8H3Q8N146 312 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 STPG2Q8N412 459 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 PARP16Q8N5Y8 322 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 PXT1Q8NFP0 134 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 OR10X1Q8NGY0 326 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 OR5AK2Q8NH90 309 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 HAVCR2Q8TDQ0 301 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 TFAP2CQ92754 450 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 LGALS12Q96DT0 336 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 WWC2-AS2Q96NR7 200 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 PDCD1LG2Q9BQ51 273 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 NOTCH3Q9UM47 2321 aa8.16□□□□□ -1.1
CLRN3-201ENST00000368671 LINC01548A6NM66 108 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 TMEM212A6NML5 194 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 SNTNA6NMZ2 147 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 NCBP2LA6PVI3 153 aaKnown RBP8.15□□□□□ -1.1
CLRN3-201ENST00000368671 NPIPB11E5RHQ5 1161 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 E9PI62 339 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 EI24O14681 340 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 HSD17B6O14756 317 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 CIB2O75838 187 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 ZFPL1O95159 310 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 IGHG2P01859 326 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 ALPLP05186 524 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 RAB3AP20336 220 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 SOX2P48431 317 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 SNRPGP62308 76 aaKnown RBP8.15□□□□□ -1.1
CLRN3-201ENST00000368671 DGCR2P98153 550 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 RSU1Q15404 277 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 SLC25A30Q5SVS4 291 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 XP32Q5T750 250 aa8.15□□□□□ -1.1
CLRN3-201ENST00000368671 ELP2Q6IA86 826 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms