RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 IGFL2Q6UWQ7 119 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
TPM3-212ENST00000368533 CRIM1Q9NZV1 1036 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 TIMM10BQ9Y5J6 103 aa9.18□□□□□ -0.94
TPM3-212ENST00000368533 IGKV3D-15A0A087WSY6 115 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 IGKV1-9A0A0C4DH69 117 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 SOD3P08294 240 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 GSTP1P09211 210 aaKnown RBP9.17□□□□□ -0.94
TPM3-212ENST00000368533 ZNF92Q03936 586 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 PDCD1Q15116 288 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 UBE2V2Q15819 145 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 TMEM128Q5BJH2 165 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 HIST2H3AQ71DI3 136 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 OPN3Q9H1Y3 402 aaPredicted RBP9.17□□□□□ -0.94
TPM3-212ENST00000368533 PLA2G2EQ9NZK7 142 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 MKRN2OSH3BPM6 223 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 EREGO14944 169 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 CRHP06850 196 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 CST2P09228 141 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 CDX1P47902 265 aaPredicted RBP9.17□□□□□ -0.94
TPM3-212ENST00000368533 IDH3GP51553 393 aaPredicted RBP9.17□□□□□ -0.94
TPM3-212ENST00000368533 CEBPGP53567 150 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 RAB35Q15286 201 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 C4orf17Q53FE4 359 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 RPL7L1Q6DKI1 246 aaKnown RBP9.17□□□□□ -0.94
TPM3-212ENST00000368533 CLEC18BQ6UXF7 455 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 IL34Q6ZMJ4 242 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 HOGA1Q86XE5 327 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 SLC30A7Q8NEW0 376 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 SMIM3Q9BZL3 60 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 BCO1Q9HAY6 547 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 PLEKHJ1Q9NW61 149 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 OR5AC2Q9NZP5 309 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 PKDREJQ9NTG1 2253 aa9.17□□□□□ -0.94
TPM3-212ENST00000368533 SPRY1O43609 319 aaPredicted RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 OR13C7P0DN81 318 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 TBPP20226 339 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 RNPS1Q15287 305 aaKnown RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 RNF126Q9BV68 326 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 C5orf66Q9H5L9 145 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 ITPR1Q14643 2758 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 ACACBO00763 2458 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 SPTAN1Q13813 2472 aaKnown RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 CEACAM4O75871 244 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 IL2RAP01589 272 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 MBP02144 154 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 CD5P06127 495 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 FCGR3AP08637 254 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 MMP7P09237 267 aaPredicted RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 FHITP49789 147 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 CYCSP99999 105 aaKnown RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 ZNF674Q2M3X9 581 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 KHDC3LQ587J8 217 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 Q6ZRG5 221 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 FOXL2NBQ6ZUU3 175 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 C6orf201Q7Z4U5 140 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 OR14K1Q8NGZ2 314 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 OR51F2Q8NH61 342 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 PIGCQ92535 297 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 MRPL37Q9BZE1 423 aaKnown RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 EIF5A2Q9GZV4 153 aaKnown RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 PUS1Q9Y606 427 aaKnown RBP eCLIP9.16□□□□□ -0.94
TPM3-212ENST00000368533 TEX13DA0A0J9YY54 714 aaPredicted RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 FAM157AC9JC47 383 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 ATXN7O15265 892 aaPredicted RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 ZNF205O95201 554 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 CSTBP04080 98 aaKnown RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 CRYGSP22914 178 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 ZNF133P52736 654 aaPredicted RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 MTCP1P56278 107 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 SPTBN1Q01082 2364 aaKnown RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 ZNF529Q6P280 563 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 MDP1Q86V88 176 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 TMEM45BQ96B21 275 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 SCGB3A2Q96PL1 93 aa9.16□□□□□ -0.94
TPM3-212ENST00000368533 FAM212BQ9NTI7 297 aaPredicted RBP9.16□□□□□ -0.94
TPM3-212ENST00000368533 TSTD3H0UI37 97 aa9.15□□□□□ -0.94
TPM3-212ENST00000368533 ERVS71-1P61550 626 aa9.15□□□□□ -0.94
TPM3-212ENST00000368533 FAM189A2Q15884 450 aa9.15□□□□□ -0.94
TPM3-212ENST00000368533 RIPPLY2Q5TAB7 128 aa9.15□□□□□ -0.94
TPM3-212ENST00000368533 FBXW9Q5XUX1 488 aa9.15□□□□□ -0.94
TPM3-212ENST00000368533 FAHD2BQ6P2I3 314 aaPredicted RBP9.15□□□□□ -0.94
TPM3-212ENST00000368533 PEG10Q86TG7 708 aaKnown RBP9.15□□□□□ -0.94
TPM3-212ENST00000368533 SARAFQ96BY9 339 aa9.15□□□□□ -0.94
TPM3-212ENST00000368533 BSCL2Q96G97 398 aaPredicted RBP9.15□□□□□ -0.94
TPM3-212ENST00000368533 FAHD2AQ96GK7 314 aa9.15□□□□□ -0.94
TPM3-212ENST00000368533 HDHD3Q9BSH5 251 aaPredicted RBP9.15□□□□□ -0.94
TPM3-212ENST00000368533 ZNF581Q9P0T4 197 aa9.15□□□□□ -0.94
TPM3-212ENST00000368533 FZR1Q9UM11 496 aa9.15□□□□□ -0.94
TPM3-212ENST00000368533 C14orf166Q9Y224 244 aaKnown RBP9.15□□□□□ -0.94
TPM3-212ENST00000368533 F8VVB4 439 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 F8VWA3 439 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 SCGB1D2O95969 90 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 IFNA17P01571 189 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 IGHG3P01860 377 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 GLI4P10075 376 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 IGHV1-2P23083 117 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 APLNRP35414 380 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 BRICD5Q6PL45 260 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 OR13G1Q8NGZ3 307 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms