RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 APOBEC3DQ96AK3 386 aaPredicted RBP1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 GOLPH3Q9H4A6 298 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 RHOFQ9HBH0 211 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 POMPQ9Y244 141 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 USH1CQ9Y6N9 552 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 KMT2EQ8IZD2 1858 aa1.5□□□□□ -2.17
ECHDC1-201ENST00000368287 POLR3AO14802 1390 aaPredicted RBP1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 TRPM6Q9BX84 2022 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 A0A1B0GU33 70 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 A0A1B0GX12 115 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 OR5H14A6NHG9 310 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 ZNF879B4DU55 563 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 E7EQL1 145 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 RNASEK-C17orf49H0YIS7 233 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 POP7O75817 140 aaKnown RBP1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 PDYNP01213 254 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 SLC35E2BP0CK96 405 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 MLNP12872 115 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 ZNF22P17026 224 aaPredicted RBP1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 ELK4P28324 431 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 CRABP2P29373 138 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 RPA3P35244 121 aaPredicted RBP1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 RHOAP61586 193 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 GOLGA7BQ2TAP0 167 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 LAMTOR1Q6IAA8 161 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 CPNE9Q8IYJ1 553 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 SELENOHQ8IZQ5 122 aaKnown RBP1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 TCAIMQ8N3R3 496 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 SLC25A45Q8N413 288 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 C3orf22Q8N5N4 141 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 OR11G2Q8NGC1 345 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 LMX1AQ8TE12 382 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 SERPINB11Q96P15 392 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 PRSS27Q9BQR3 290 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 OR51B4Q9Y5P0 310 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 MYO15BQ96JP2 1530 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 SPATA31E1Q6ZUB1 1445 aa1.49□□□□□ -2.17
ECHDC1-201ENST00000368287 ABCB11O95342 1321 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 TRAV8-2A0A0B4J237 113 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 IGKV1-12A0A0C4DH73 117 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 A0A1W2PRG6 482 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 I3L4J1 428 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 J3QLI3 93 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 LECT2O14960 151 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 UBDO15205 165 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 SYNGR2O43760 224 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 TNFAIP8O95379 198 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 IGKV1D-12P01611 117 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 NQO2P16083 231 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 RAB2AP61019 212 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 RAB31Q13636 194 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 SCXQ7RTU7 201 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 MSRB3Q8IXL7 192 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 HS3ST5Q8IZT8 346 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 SPERTQ8NA61 448 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 BPIFB6Q8NFQ5 453 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 OR10D4PQ8NGN7 298 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 FAM45AQ8TCE6 357 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 PDCD6IPQ8WUM4 868 aaKnown RBP1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 KCTD4Q8WVF5 259 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 IFT81Q8WYA0 676 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 MRAP2Q96G30 205 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 PYURFQ96I23 114 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 FAAP24Q9BTP7 215 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 POTEKPQ9BYX7 375 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 ALX4Q9H161 411 aaPredicted RBP1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 OR51E2Q9H255 320 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 FADS3Q9Y5Q0 445 aa1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 DNMT1P26358 1616 aaKnown RBP1.48□□□□□ -2.17
ECHDC1-201ENST00000368287 BRD4O60885 1362 aaPredicted RBP1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 ARAP3Q8WWN8 1544 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 FAM25EA8MYX2 175 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 TMEM250H0YL14 139 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 K7ERQ8 282 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 FABP7O15540 132 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 FGF16O43320 207 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 GPR75O95800 540 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 CTSGP08311 255 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 SYT1P21579 422 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 PYCR1P32322 319 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 MP68P56378 58 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 XRCC4Q13426 336 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 FLOT2Q14254 428 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 FAM162BQ5T6X4 162 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 SSX7Q7RTT5 188 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 TCF23Q7RTU1 214 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 OLIG3Q7RTU3 272 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 LRRC6Q86X45 466 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 KRTCAP2Q8N6L1 136 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 ZNF738Q8NE65 137 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 RAD51AP1Q96B01 352 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 CCDC124Q96CT7 223 aaKnown RBP1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 CMBLQ96DG6 245 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 EBPLQ9BY08 206 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 TREM1Q9NP99 234 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 NRBP2Q9NSY0 501 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 SLC23A2Q9UGH3 650 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 LINC00588Q9Y4M8 146 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 PHLDA3Q9Y5J5 127 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms