RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 OR10P1Q8NGE3 313 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 RPUSD4Q96CM3 377 aaKnown RBP7.31□□□□□ -1.24
PTPRK-206ENST00000368215 PFDN5Q99471 154 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 HIPK2Q9H2X6 1198 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 DEPPQ9NTK1 212 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 RAB5CP51148 216 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 TAS2R30P59541 319 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 RIPPLY2Q5TAB7 128 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 ASPHD2Q6ICH7 369 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 ISOC2Q96AB3 205 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 HEXA-AS1Q9H8Q6 139 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 FER1L5A0AVI2 2057 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 LTBP2Q14767 1821 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 ZNF106Q9H2Y7 1883 aaKnown RBP7.31□□□□□ -1.24
PTPRK-206ENST00000368215 ABCD4O14678 606 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 CYTIPO60759 359 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 VDAC1P21796 283 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 BMP5P22003 454 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 RPL19P84098 196 aaKnown RBP7.31□□□□□ -1.24
PTPRK-206ENST00000368215 Q3ZCU0 254 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 PDZD11Q5EBL8 140 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 CALHM1Q8IU99 346 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 Q8IYB0 196 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 TMEM105Q8N8V8 129 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 LRRC29Q8WV35 223 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 MRGPRFQ96AM1 343 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 TREM2Q9NZC2 230 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 LOC102723996A0A087X1L8 192 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 FAM74A7A6NL05 159 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 J3QT63 122 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 SYNGR3O43761 229 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 SOX15O60248 233 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 CD8AP01732 235 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 MBPP02686 304 aaPredicted RBP7.31□□□□□ -1.24
PTPRK-206ENST00000368215 OR8U8P0C7N1 319 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 SP9P0CG40 484 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 RAB4BP61018 213 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 EWSR1Q01844 656 aaKnown RBP eCLIP7.31□□□□□ -1.24
PTPRK-206ENST00000368215 CEACAM21Q3KPI0 293 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 FAM74A3Q4VXF1 159 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 NECAP1Q8NC96 275 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 HPSE2Q8WWQ2 592 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 SAT2Q96F10 170 aaPredicted RBP7.31□□□□□ -1.24
PTPRK-206ENST00000368215 MMP24Q9Y5R2 645 aa7.31□□□□□ -1.24
PTPRK-206ENST00000368215 C17orf112F2Z3M2 114 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 ENSAO43768 121 aaKnown RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 KIAA0141Q14154 515 aaPredicted RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 MPV17LQ2QL34 196 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 SCCPDHQ8NBX0 429 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 ARV1Q9H2C2 271 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 MED9Q9NWA0 146 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 KIAA2026Q5HYC2 2103 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 IGLV3-32A0A0A0MS00 114 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 LOC390937A0A1W2PQ73 354 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 RNF222A6NCQ9 220 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 M0R1X1 148 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 PSG2P11465 335 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 PMELP40967 661 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 PSMB3P49720 205 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 FGF8P55075 233 aaPredicted RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 PLGLAQ15195 96 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 KCNMB1Q16558 191 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 ZNF826PQ6ZT77 177 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 OR52M1Q8NGK5 317 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 OR1K1Q8NGR3 316 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 FGFBP3Q8TAT2 258 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 NTNG2Q96CW9 530 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 CRYM-AS1A6NIL9 109 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 ZNF727A8MUV8 499 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 SCAF4O95104 1147 aaKnown RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 ARG1P05089 322 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 FGF12P61328 243 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 IZUMO4Q1ZYL8 232 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 CXorf66Q5JRM2 361 aaPredicted RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 FAM166AQ6J272 317 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 FAM24BQ8N5W8 94 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 DDA1Q9BW61 102 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 ZNF552Q9H707 407 aaPredicted RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 DECR2Q9NUI1 292 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 NDRG3Q9UGV2 375 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 V9GYS6 101 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 MKI67P46013 3256 aaKnown RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 SPTAN1Q13813 2472 aaKnown RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 PCNX1Q96RV3 2341 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 PINLYPA6NC86 204 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 PRRG2O14669 202 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 HKR1P10072 659 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 MUC1P15941 1255 aaPredicted RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 KITLGP21583 273 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 P2RY1P47900 373 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 CEBPDP49716 269 aaPredicted RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 RUNX1Q01196 453 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 ZFP36L1Q07352 338 aaKnown RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 USF2Q15853 346 aaPredicted RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 SMUG1Q53HV7 270 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 ZIC4Q8N9L1 334 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 RTBDNQ9BSG5 229 aaPredicted RBP7.3□□□□□ -1.24
PTPRK-206ENST00000368215 OSGIN2Q9Y236 505 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 OR2W1Q9Y3N9 320 aa7.3□□□□□ -1.24
PTPRK-206ENST00000368215 ATP23Q9Y6H3 246 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms