RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 FAM90A23PA8MXZ1 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 TRAPPC2LH3BP13 241 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 MFNGO00587 321 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 CSF1P09603 554 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A15PP0C7V4 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A13PP0C7W8 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A14PP0C7W9 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 FAM90A24PP0C7X0 464 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 GNB3P16520 340 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 BLVRBP30043 206 aaPredicted RBP10.25□□□□□ -0.77
USF1-203ENST00000368021 RBM11P57052 281 aaKnown RBP10.25□□□□□ -0.77
USF1-203ENST00000368021 MZT1Q08AG7 82 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 MSMPQ1L6U9 139 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 C15orf54Q8N8G6 183 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 ARHGAP5-AS1Q96IT6 56 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 SSX3Q99909 188 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 PLK3Q9H4B4 646 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 MTCH1Q9NZJ7 389 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 HSF4Q9ULV5 492 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 POLDIP2Q9Y2S7 368 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 CARHSP1Q9Y2V2 147 aaKnown RBP10.25□□□□□ -0.77
USF1-203ENST00000368021 NOTCH2Q04721 2471 aa10.25□□□□□ -0.77
USF1-203ENST00000368021 C5orf52A6NGY3 159 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 MLNRO43193 412 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 CA11O75493 328 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 TCRBP04435 133 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 NPBWR2P48146 333 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 SELENOVP59797 346 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 FGF12P61328 243 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 GUCA2AQ02747 115 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 BSPH1Q075Z2 132 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 ZNF154Q13106 437 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 COTL1Q14019 142 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 PCGF3Q3KNV8 242 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 OLFML2AQ68BL7 652 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 Q6ZR03 302 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 WDR86Q86TI4 376 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 FBXL14Q8N1E6 418 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 CXXC4Q9H2H0 198 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 ZNF442Q9H7R0 627 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 FZR1Q9UM11 496 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 ST3GAL6Q9Y274 331 aa10.24□□□□□ -0.77
USF1-203ENST00000368021 SNRPGP15A8MWD9 76 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 CFDP00746 253 aaPredicted RBP10.23□□□□□ -0.77
USF1-203ENST00000368021 BCL3P20749 454 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 GABRR1P24046 479 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 BTCP35070 178 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 FAUP35544 74 aaKnown RBP10.23□□□□□ -0.77
USF1-203ENST00000368021 TAF9Q16594 264 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 GSG1LQ6UXU4 331 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 MEX3BQ6ZN04 569 aaKnown RBP10.23□□□□□ -0.77
USF1-203ENST00000368021 LINC00596Q86U02 117 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 Q8IYB0 196 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 SCCPDHQ8NBX0 429 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 OR1S1Q8NH92 325 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 SLAMF9Q96A28 289 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 MRPL24Q96A35 216 aaKnown RBP10.23□□□□□ -0.77
USF1-203ENST00000368021 C2orf88Q9BSF0 95 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 PECRQ9BY49 303 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 TLNRD1Q9H1K6 362 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 CA10Q9NS85 328 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 DUSP13Q9UII6 198 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 CACNA1DQ01668 2161 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 ABCA12Q86UK0 2595 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 HCFC1P51610 2035 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 ROS1P08922 2347 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 H0YL77 283 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 GEMIN2O14893 280 aaKnown RBP10.23□□□□□ -0.77
USF1-203ENST00000368021 SYNGR1O43759 233 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 NDUFS6O75380 124 aaKnown RBP10.23□□□□□ -0.77
USF1-203ENST00000368021 COX6B1P14854 86 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 GPX4P36969 197 aaPredicted RBP10.23□□□□□ -0.77
USF1-203ENST00000368021 TAS2R19P59542 299 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 PIGYQ3MUY2 71 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 NKAPLQ5M9Q1 402 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 C10orf91Q5T1B1 145 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 NCMAPQ5T1S8 102 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 SLC22A25Q6T423 547 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 LRP11Q86VZ4 500 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 TMEM229BQ8NBD8 167 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 OR10AD1Q8NGE0 317 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 EGLN1Q9GZT9 426 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 MSL2Q9HCI7 577 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 CHMP1AQ9HD42 196 aaPredicted RBP10.23□□□□□ -0.77
USF1-203ENST00000368021 HRASLSQ9HDD0 168 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 PLEKHJ1Q9NW61 149 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 TAS2R3Q9NYW6 316 aa10.23□□□□□ -0.77
USF1-203ENST00000368021 FAM74A7A6NL05 159 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 MCRIP1C9JLW8 97 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 PTBP3O95758 552 aaKnown RBP10.22□□□□□ -0.77
USF1-203ENST00000368021 CHATP28329 748 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 MPV17LQ2QL34 196 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 FAM74A3Q4VXF1 159 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 VHLLQ6RSH7 139 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 REC114Q7Z4M0 266 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 TRAPPC6BQ86SZ2 158 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 COQ8AQ8NI60 647 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 NUDCD2Q8WVJ2 157 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 ELMOD3Q96FG2 381 aa10.22□□□□□ -0.77
USF1-203ENST00000368021 MS4A7Q9GZW8 240 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms