RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 R4GN57 208 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 OR7C2O60412 319 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 GJB5O95377 273 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 PAQR6Q6TCH4 344 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 OR13G1Q8NGZ3 307 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 YAE1D1Q9NRH1 226 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 PSG11Q9UQ72 335 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 CCDC88AQ3V6T2 1871 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 FGF16O43320 207 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 PNLIPP16233 465 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 DRD3P35462 400 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 SLC10A6Q3KNW5 377 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 UMODP07911 640 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 PLNP26678 52 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TNFRSF4P43489 277 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 RBPJQ06330 500 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 CXCL17Q6UXB2 119 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 HOGA1Q86XE5 327 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 IL36AQ9UHA7 158 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 KIR2DL1P43626 348 aaPredicted RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 RSPO4Q2I0M5 234 aaPredicted RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 ACRP10323 421 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 RAC3P60763 192 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 PPP2CAP67775 309 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 FAM169BQ8N8A8 192 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 CES1P1Q9UKY3 287 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TRAV26-1A0A087WT03 109 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 GPR6P46095 362 aaPredicted RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 NUBP1P53384 320 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 FEZF1A0PJY2 475 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 LMX1BO60663 402 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 RPL27P61353 136 aaKnown RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 OR1N1Q8NGS0 311 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM170AQ8WVE7 144 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TCTEX1D4Q5JR98 221 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 CARD19Q96LW7 228 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 RARRES2Q99969 163 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 SIGLEC8Q9NYZ4 499 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 INSIG2Q9Y5U4 225 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 HIDE1A8MVS5 230 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 RAB29O14966 203 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF157P51786 506 aaPredicted RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TAF10Q12962 218 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM106CQ9BVX2 250 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 FRS3O43559 492 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 SRD5A1P18405 259 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TUSC1Q2TAM9 212 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 PIPOXQ9P0Z9 390 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 OR14J1Q9UGF5 321 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF593O00488 134 aaPredicted RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 B4GALT2O60909 372 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 UBE2G1P62253 170 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 SRYQ05066 204 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 GPM6BQ13491 265 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 OR12D1P0DN82 309 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 RPL8P62917 257 aaKnown RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TRAPPC6BQ86SZ2 158 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 OR4C12Q96R67 309 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 SIGMAR1Q99720 223 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 HSPB9Q9BQS6 159 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TRIP11Q15643 1979 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 DIO2Q92813 273 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 OR8B4Q96RC9 309 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 NXT2Q9NPJ8 142 aaKnown RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 SLCO1C1Q9NYB5 712 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 LIPGQ9Y5X9 500 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 TIMM23O14925 209 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 PGFP49763 221 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 EMDP50402 254 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 KLHDC2Q9Y2U9 406 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 NUMA1Q14980 2115 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 IGHMP01871 453 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 DGCR2P98153 550 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF146Q15072 292 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 PSMB11A5LHX3 300 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 GOSR1O95249 250 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 SLC2A10O95528 541 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 KIR3DL2P43630 455 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 METRNLQ641Q3 311 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 SPATA25Q9BR10 227 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 C5AR2Q9P296 337 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 EDIL3O43854 480 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 FZD5Q13467 585 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 LCN10Q6JVE6 187 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 MRPL38Q96DV4 380 aaKnown RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 GUCD1Q96NT3 240 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 IL2RGP31785 369 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 HSD52Q0P140 79 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 OR14C36Q8NHC7 312 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 FBXO17Q96EF6 278 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF257Q9Y2Q1 563 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 CSAG2Q9Y5P2 127 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 HAPLN2Q9GZV7 340 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 HCRTR1O43613 425 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 FABP6P51161 128 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 CHST8Q9H2A9 424 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 ZMAT3Q9HA38 289 aaKnown RBP3.31□□□□□ -1.88
SYNE1-207ENST00000367255 OSTCQ9NRP0 149 aa3.31□□□□□ -1.88
SYNE1-207ENST00000367255 KNDC1Q76NI1 1749 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1W2PP11 408 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms