RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 H3F3AP84243 136 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 FAM210BQ96KR6 192 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 SRXN1Q9BYN0 137 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 CCL28Q9NRJ3 127 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 RIF1Q5UIP0 2472 aaKnown RBP11.69□□□□□ -0.54
PRKN-205ENST00000366897 A0A0G2JRQ6 117 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 A0A0J9YW62 118 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 A0A1B0GW64 132 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 CRYGSP22914 178 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 GLIPR1P48060 266 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 C10orf128Q5T292 105 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 DPPA2Q7Z7J5 298 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 IL22RA1Q8N6P7 574 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 TMEM54Q969K7 222 aa11.69□□□□□ -0.54
PRKN-205ENST00000366897 OR5H1A6NKK0 313 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 SP9P0CG40 484 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 GLB1P16278 677 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 CD200P41217 278 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 HLA-DRB3P79483 266 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 CNN3Q15417 329 aaKnown RBP11.68□□□□□ -0.54
PRKN-205ENST00000366897 WDR25Q64LD2 544 aaPredicted RBP11.68□□□□□ -0.54
PRKN-205ENST00000366897 SSX9Q7RTT3 188 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 ZNF611Q8N823 705 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 NECAP1Q8NC96 275 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 NEK7Q8TDX7 302 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 UNKLQ9H9P5 680 aaKnown RBP11.68□□□□□ -0.54
PRKN-205ENST00000366897 CD55P08174 381 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 ZNF506Q5JVG8 444 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 SLC23A3Q6PIS1 610 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 SYT13Q7L8C5 426 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 SPEM1Q8N4L4 309 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 OR51H1Q8NH63 302 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 OR1F12Q8NHA8 337 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 EXTL1Q92935 676 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 SIGLEC12Q96PQ1 595 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 CRIM1Q9NZV1 1036 aa11.68□□□□□ -0.54
PRKN-205ENST00000366897 IGLV3-32A0A0A0MS00 114 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 A0A1W2PR80 420 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 SYNGR3O43761 229 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 CDS2O95674 445 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 NDUFB7P17568 137 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 RBM11P57052 281 aaKnown RBP11.67□□□□□ -0.54
PRKN-205ENST00000366897 HIST1H3AP68431 136 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 HIST2H3PS2Q5TEC6 136 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 SSX7Q7RTT5 188 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 FADS6Q8N9I5 356 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 OPA3Q9H6K4 179 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 R4GN57 208 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 NBEAQ8NFP9 2946 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 IGLV3-12A0A075B6K2 115 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 HMGB3O15347 200 aaKnown RBP11.67□□□□□ -0.54
PRKN-205ENST00000366897 CCNOP22674 350 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 CXCL12P48061 93 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 MRPS34P82930 218 aaKnown RBP11.67□□□□□ -0.54
PRKN-205ENST00000366897 HERPUD1Q15011 391 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 C9orf135Q5VTT2 229 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 SLC25A31Q9H0C2 315 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 RPRMQ9NS64 109 aa11.67□□□□□ -0.54
PRKN-205ENST00000366897 PTPRZ1P23471 2315 aaPredicted RBP11.66□□□□□ -0.54
PRKN-205ENST00000366897 HSPB1P04792 205 aaKnown RBP11.66□□□□□ -0.54
PRKN-205ENST00000366897 IAPPP10997 89 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 CCL2P13500 99 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 TUBG1P23258 451 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 PAX9P55771 341 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 FAM90A2PQ658T7 463 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 UBALD1Q8TB05 177 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 PLPPR1Q8TBJ4 325 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 PACRGQ96M98 296 aaPredicted RBP11.66□□□□□ -0.54
PRKN-205ENST00000366897 IER2Q9BTL4 223 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 A0A087WWC5 75 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 A0A087X0M5 115 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 A0A1B0GX30 115 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 PHOX2AO14813 284 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 NBL1P41271 181 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 PSG4Q00888 419 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 FAM27BQ5VT28 67 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 LHFPL2Q6ZUX7 228 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 GPR137CQ8N3F9 429 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 GPR179Q6PRD1 2367 aa11.66□□□□□ -0.54
PRKN-205ENST00000366897 EP300Q09472 2414 aaPredicted RBP11.66□□□□□ -0.54
PRKN-205ENST00000366897 PRRC2CQ9Y520 2896 aaKnown RBP11.66□□□□□ -0.54
PRKN-205ENST00000366897 TRAV39A0A0B4J263 110 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 SLC22A20A6NK97 555 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 ZIC3O60481 467 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 BCL3P20749 454 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 DDTP30046 118 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 GUSBP11Q6P575 273 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 BEND4Q6ZU67 534 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 YRDCQ86U90 279 aaKnown RBP11.65□□□□□ -0.54
PRKN-205ENST00000366897 HIST1H2BLQ99880 126 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 FSCN3Q9NQT6 498 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 UFSP2Q9NUQ7 469 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 TAAR3PQ9P1P4 343 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 DKKL1Q9UK85 242 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 LOC102723971A0A1B0GUV8 181 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 ZNF732B4DXR9 585 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 TK1P04183 234 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 SELLP14151 372 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 UCP3P55916 312 aa11.65□□□□□ -0.54
PRKN-205ENST00000366897 RAB35Q15286 201 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms