RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 C1QL4Q86Z23 238 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 LYG1Q8N1E2 194 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OSR2Q8N2R0 312 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 DHRSXQ8N5I4 330 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 SETD9Q8NE22 299 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR10A7Q8NGE5 316 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CYGBQ8WWM9 190 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CITED2Q99967 270 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 METTL9Q9H1A3 318 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 MMP28Q9H239 520 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 IDI2-AS1Q9NZ38 188 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ST3GAL6Q9Y274 331 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 HSPE1-MOB4S4R3N1 261 aa10.91□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TRAV8-7A0A075B6U6 113 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TRBV5-7A0A0A0MS05 114 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 MAGEA13PA6NCF6 341 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 G3V4G9 280 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 H3BUI4 141 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 J3QR06 171 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TOR1AO14656 332 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 GNAO1P09471 354 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 MYL12AP19105 171 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FSTP19883 344 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 BDKRB2P30411 391 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 VDAC2P45880 294 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 EMX1Q04741 257 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ST3GAL4Q11206 333 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 Q499Y3 187 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 YIF1BQ5BJH7 314 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 DDI2Q5TDH0 399 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 SLC16A12Q6ZSM3 486 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 THNSL2Q86YJ6 484 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 SUMF2Q8NBJ7 301 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OR5M11Q96RB7 305 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 DPCDQ9BVM2 203 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 PLCXD1Q9NUJ7 323 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 CNOT2Q9NZN8 540 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ING4Q9UNL4 249 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 PSG11Q9UQ72 335 aa10.9□□□□□ -0.66
TNFRSF1A-202ENST00000366159 GEMIN2O14893 280 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CASQ2O14958 399 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CD1AP06126 327 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 NFYBP25208 207 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 GLP1RP43220 463 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 PPP3R1P63098 170 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 RIPK1Q13546 671 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 RCN1Q15293 331 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 TCTEX1D4Q5JR98 221 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 OGFRL1Q5TC84 451 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 DMRTA1Q5VZB9 504 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CCDC144NLQ6NUI1 221 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 LINC00596Q86U02 117 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MRGPRDQ8TDS7 321 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 LEAP2Q969E1 77 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 AKR1E2Q96JD6 320 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ZNF184Q99676 751 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 SLC25A33Q9BSK2 321 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 FAM192AQ9GZU8 254 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 FKBP14Q9NWM8 211 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 PSORS1C1Q9UIG5 152 aa10.89□□□□□ -0.67
TNFRSF1A-202ENST00000366159 TRAV39A0A0B4J263 110 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 A0A1W2PP11 408 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 A0A1W2PPI3 338 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 C15orf65H3BRN8 121 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ZNF780AO75290 641 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 GZMHP20718 246 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 SSTR5P35346 364 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CAPGP40121 348 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ARHGDIBP52566 201 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 DIAPH2-AS1Q14236 149 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MPV17LQ2QL34 196 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ZFP41Q8N8Y5 198 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 OR5AU1Q8NGC0 362 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 RFESDQ8TAC1 157 aa10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 PAK1IP1Q9NWT1 392 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-202ENST00000366159 EFCAB10A6NFE3 127 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 PIN1P1O15428 100 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 XPNPEP2O43895 674 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 OR7C1O76099 320 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 IGHV3-7P01780 117 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CSTBP04080 98 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 SERPINA2P20848 420 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MNDAP41218 407 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MED21Q13503 144 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 RBM39Q14498 530 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ABCA11PQ4W5N1 156 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CDH26Q8IXH8 852 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 GAPTQ8N292 157 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 WFDC9Q8NEX5 89 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 OR14A2Q96R54 314 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 PCDHB16Q9NRJ7 776 aa10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 CHCHD3Q9NX63 227 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 RCC2Q9P258 522 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 AMMECR1Q9Y4X0 333 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-202ENST00000366159 ORC5O43913 435 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 PEX14O75381 377 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 MT-ND4P03905 459 aa10.86□□□□□ -0.67
TNFRSF1A-202ENST00000366159 LPLP06858 475 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms