RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 DUX4L2P0CJ85 424 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 DUX4L3P0CJ86 424 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 DUX4L4P0CJ87 422 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 DUX4L5P0CJ88 424 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 DUX4L6P0CJ89 424 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 DUX4L7P0CJ90 424 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 SELLP14151 372 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 GIFP27352 417 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 RSBN1Q5VWQ0 802 aaPredicted RBP17.17■□□□□ 0.34
SHISA4-201ENST00000362011 ZNF57Q68EA5 555 aaPredicted RBP17.17■□□□□ 0.34
SHISA4-201ENST00000362011 SLC35E4Q6ICL7 350 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 DUX4L9Q6RFH8 374 aaPredicted RBP17.17■□□□□ 0.34
SHISA4-201ENST00000362011 SPICQ8N5J4 248 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 ZFAND2BQ8WV99 257 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 TAS2R8Q9NYW2 309 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 DUX4Q9UBX2 424 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 ANAPC10Q9UM13 185 aa17.17■□□□□ 0.34
SHISA4-201ENST00000362011 TMEM30CPA0ZSE6 113 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 CEACAM18A8MTB9 384 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 ECDO95905 644 aaPredicted RBP17.16■□□□□ 0.34
SHISA4-201ENST00000362011 NAPSAO96009 420 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 CSF1P09603 554 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 IFITM3Q01628 133 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 PAX5Q02548 391 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 KRBOX4Q5JUW0 171 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 STEAP3Q658P3 488 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 GDPD3Q7L5L3 318 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 LYSMD2Q8IV50 215 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 TOMM5Q8N4H5 51 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 GVQW1Q8N7I0 195 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 SETD6Q8TBK2 473 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 MRPL30Q8TCC3 161 aaKnown RBP17.16■□□□□ 0.34
SHISA4-201ENST00000362011 COQ2Q96H96 371 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 ING3Q9NXR8 418 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 MIOXQ9UGB7 285 aa17.16■□□□□ 0.34
SHISA4-201ENST00000362011 TRBV6-6A0A0A6YYG2 114 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 ANKRD20A5PA0PJZ0 165 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 FUOMA2VDF0 154 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 POM121CA8CG34 1229 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 NDUFB3O43676 98 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 FCER2P06734 321 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 RPS2P15880 293 aaKnown RBP17.15■□□□□ 0.34
SHISA4-201ENST00000362011 NAT1P18440 290 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 AP3S2P59780 193 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 AESQ08117 197 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 EDDM3AQ14507 147 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 LRRC10Q5BKY1 277 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 CLEC2AQ6UVW9 174 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 HOGA1Q86XE5 327 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 GAPTQ8N292 157 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 OR4K15Q8NH41 348 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 FAM168AQ92567 244 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 ST6GALNAC5Q9BVH7 336 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 CTSZQ9UBR2 303 aa17.15■□□□□ 0.34
SHISA4-201ENST00000362011 SLC25A10Q9UBX3 287 aaPredicted RBP17.15■□□□□ 0.34
SHISA4-201ENST00000362011 ZNF230Q9UIE0 474 aaPredicted RBP17.15■□□□□ 0.34
SHISA4-201ENST00000362011 ZNF107Q9UII5 783 aaPredicted RBP17.15■□□□□ 0.34
SHISA4-201ENST00000362011 FBN3Q75N90 2809 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 NDUFS8O00217 210 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 MT-ND4P03905 459 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 ZNF880Q6PDB4 577 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 MOB1BQ7L9L4 216 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 TMEM229BQ8NBD8 167 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 MAFIPQ8WZ33 124 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 NEIL1Q96FI4 390 aaPredicted RBP17.14■□□□□ 0.33
SHISA4-201ENST00000362011 PIMREGQ9BSJ6 248 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 ZNF286AQ9HBT8 521 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 Q9N2K0 584 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 KIF25Q9UIL4 384 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 TRAPPC2LQ9UL33 140 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 PCDHB10Q9UN67 800 aa17.14■□□□□ 0.33
SHISA4-201ENST00000362011 FN1P02751 2386 aaKnown RBP17.14■□□□□ 0.33
SHISA4-201ENST00000362011 HEXAP06865 529 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 ERP29P30040 261 aaKnown RBP17.13■□□□□ 0.33
SHISA4-201ENST00000362011 GLIPR1P48060 266 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 EDDM3BP56851 147 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 DSCR9P59020 149 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 TAS2R19P59542 299 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 KLF9Q13886 244 aaPredicted RBP17.13■□□□□ 0.33
SHISA4-201ENST00000362011 SRSF7Q16629 238 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHISA4-201ENST00000362011 NLRC3Q7RTR2 1065 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 LRRC75A-AS1Q8N1F1 130 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 BEST4Q8NFU0 473 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 OR8B3Q8NGG8 313 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 OR8B2Q96RD0 313 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 BPESC1Q9GZL8 116 aa17.13■□□□□ 0.33
SHISA4-201ENST00000362011 PATZ1Q9HBE1 687 aaKnown RBP17.13■□□□□ 0.33
SHISA4-201ENST00000362011 MEIKINA0A087WXM9 373 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 LINC00854A0A1B0GVQ3 168 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 DVL1O14640 695 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 NDUFB7P17568 137 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 P2RX3P56373 397 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 DEFA1P59665 94 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 DEFA3P59666 94 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 OR52W1Q6IF63 320 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 Q6ZPA2 131 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 Q71RC1 249 aaPredicted RBP17.12■□□□□ 0.33
SHISA4-201ENST00000362011 C10orf105Q8TEF2 133 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 CCDC107Q8WV48 283 aa17.12■□□□□ 0.33
SHISA4-201ENST00000362011 SNAPC3Q92966 411 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms