RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 IGHV1-18A0A0C4DH31 117 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 ZNF850A8MQ14 1090 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 CTSDP07339 412 aaPredicted RBP11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 ZNF83P51522 516 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 FUT6P51993 359 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 AKR1C2P52895 323 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 AKR1C1Q04828 323 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 SPATA46Q5T0L3 261 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 FBXW12Q6X9E4 464 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 SSX8Q7RTT4 187 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 HIST1H2AAQ96QV6 131 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 MICU1Q9BPX6 476 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 BCL2L14Q9BZR8 327 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 METTL9Q9H1A3 318 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 TAF9BQ9HBM6 251 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 PRR13Q9NZ81 148 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 M0R1B8 84 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 CST4P01036 141 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 IAH1Q2TAA2 248 aaPredicted RBP11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 SHEQ5VZ18 495 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 LDLRAD3Q86YD5 345 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 SMIM8Q96KF7 97 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 ZNF2Q9BSG1 426 aaPredicted RBP11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 OR2J1Q9GZK6 312 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 UQCC1Q9NVA1 299 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 MLXQ9UH92 298 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 KCNIP3Q9Y2W7 256 aa11.23□□□□□ -0.61
SQSTM1-201ENST00000360718 TMEM225BP0DP42 221 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 RAC2P15153 192 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 SELEP16581 610 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 PVALBP20472 110 aaPredicted RBP11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 ERVS71-1P61550 626 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 PRDX4Q13162 271 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 GUCA2BQ16661 112 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 DHRS7BQ6IAN0 325 aaPredicted RBP11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 ZDHHC23Q8IYP9 409 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 BHLHE23Q8NDY6 225 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 SLC25A40Q8TBP6 338 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 MAFIPQ8WZ33 124 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 CYYR1Q96J86 154 aa11.22□□□□□ -0.61
SQSTM1-201ENST00000360718 IGHV2OR16-5A0A0B4J2B6 119 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 JTBO76095 146 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 CRYAAP02489 173 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 ADCYAP1P18509 176 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 GABRR1P24046 479 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 CAV2P51636 162 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 RBM39Q14498 530 aaKnown RBP11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 OR2T2Q6IF00 324 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 OR51F2Q8NH61 342 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 HRH4Q9H3N8 390 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 RHOFQ9HBH0 211 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 MPC1Q9Y5U8 109 aa11.21□□□□□ -0.61
SQSTM1-201ENST00000360718 K7EPK0 472 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 HKR1P10072 659 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 RPL12P30050 165 aaKnown RBP11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 CHRNB4P30926 498 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 CDSNQ15517 529 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 MST1LQ2TV78 715 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 C6orf201Q7Z4U5 140 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 FAM71E2Q8N5Q1 922 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 OR4A4PQ8NGN8 299 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 Q96M66 194 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 TLNRD1Q9H1K6 362 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 DECR2Q9NUI1 292 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 ANXA10Q9UJ72 324 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 HSF4Q9ULV5 492 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 POMT1Q9Y6A1 747 aa11.21□□□□□ -0.62
SQSTM1-201ENST00000360718 CRYM-AS1A6NIL9 109 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 LILRA1O75019 489 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 GAPDHP04406 335 aaKnown RBP11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 HOXA1P49639 335 aaPredicted RBP11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 SULT1A2P50226 295 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 ASCL1P50553 236 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 ADORA2A-AS1P86434 159 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 RSU1Q15404 277 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 CEACAM21Q3KPI0 293 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 ZNF718Q3SXZ3 478 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 PLEKHA2Q9HB19 425 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 NECAP2Q9NVZ3 263 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 ATXN7O15265 892 aaPredicted RBP11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 MED6O75586 246 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 DTYMKP23919 212 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 GCH1P30793 250 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 SRSF3P84103 164 aaKnown RBP11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 RPL7L1Q6DKI1 246 aaKnown RBP11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 TMEM200AQ86VY9 491 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 FOXRED2Q8IWF2 684 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 OR5A2Q8NGI9 324 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 KLF14Q8TD94 323 aaPredicted RBP11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 PARP11Q9NR21 331 aa11.2□□□□□ -0.62
SQSTM1-201ENST00000360718 RNASEK-C17orf49H0YIS7 233 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 DEDDO75618 318 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 OR5H8P0DN80 308 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 UQCRFS1P47985 274 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 B2MP61769 119 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 FAM76BQ5HYJ3 339 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 TMEM88Q6PEY1 159 aa11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 MARS2Q96GW9 593 aaKnown RBP11.19□□□□□ -0.62
SQSTM1-201ENST00000360718 NRIP2Q9BQI9 281 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms