RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 TEX38Q6PEX7 206 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 FAM185AQ8N0U4 392 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 SLC37A2Q8TED4 501 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 PGAM5Q96HS1 289 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 NAT8Q9UHE5 227 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 CELSR3Q9NYQ7 3312 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 TDRD6O60522 2096 aaKnown RBP12.91□□□□□ -0.34
UBAP1-202ENST00000359544 SOX15O60248 233 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 IDH3GP51553 393 aaPredicted RBP12.91□□□□□ -0.34
UBAP1-202ENST00000359544 C1orf61Q13536 156 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 RABEPKQ7Z6M1 372 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 ZNF573Q86YE8 665 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 IL22RA1Q8N6P7 574 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 OR10J5Q8NHC4 309 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 FAAP24Q9BTP7 215 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 MRPL13Q9BYD1 178 aaKnown RBP12.91□□□□□ -0.34
UBAP1-202ENST00000359544 FRYQ5TBA9 3013 aa12.91□□□□□ -0.34
UBAP1-202ENST00000359544 NCOR2Q9Y618 2525 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 C3orf85A0A1B0GTC6 90 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 H0YIG0 161 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 CST7O76096 145 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 DDAH2O95865 285 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 IFNA1P01562 189 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 OPRM1P35372 400 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 RRADP55042 308 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 NCR3LG1Q68D85 454 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 OR11L1Q8NGX0 322 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 ST8SIA1Q92185 356 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 DDIT4LQ96D03 193 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 TP53RKQ96S44 253 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 SPAARA0A1B0GVQ0 90 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 A0A1W2PNV4 684 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 TM4SF5O14894 197 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 IFNA5P01569 189 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 CELA2BP08218 269 aaPredicted RBP12.9□□□□□ -0.34
UBAP1-202ENST00000359544 OR3A1P47881 315 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 HNRNPKP61978 463 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBAP1-202ENST00000359544 MPV17LQ2QL34 196 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 C16orf82Q7Z2V1 217 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 ZNF695Q8IW36 515 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM217Q8N7C4 229 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 LIN37Q96GY3 246 aaPredicted RBP12.9□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM222Q9H0R3 208 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 ZNF286AQ9HBT8 521 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 Q9N2K0 584 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 PNRC2Q9NPJ4 139 aaKnown RBP12.9□□□□□ -0.34
UBAP1-202ENST00000359544 ALKBH4Q9NXW9 302 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 RNF150Q9ULK6 438 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 VDAC3Q9Y277 283 aa12.9□□□□□ -0.34
UBAP1-202ENST00000359544 MPPED1O15442 326 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 DHRS3O75911 302 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 IGHG1P01857 330 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 TUBG1P23258 451 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 DMRTC1Q5HYR2 192 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 SLC25A24Q6NUK1 477 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 OR2V1Q8NHB1 315 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 AGMATQ9BSE5 352 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 SERINC1Q9NRX5 453 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 DLL3Q9NYJ7 618 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 FKBP11Q9NYL4 201 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 IL17BQ9UHF5 180 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 DUXBA0A1W2PPF3 345 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 B4E171 279 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 RER1O15258 196 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 TOX3O15405 576 aaPredicted RBP12.89□□□□□ -0.35
UBAP1-202ENST00000359544 CER1O95813 267 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 SCGB1D1O95968 90 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 IGLV3-1P01715 115 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 MMP7P09237 267 aaPredicted RBP12.89□□□□□ -0.35
UBAP1-202ENST00000359544 TSPAN7P41732 249 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 GALR1P47211 349 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 ADIRFQ15847 76 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 C10orf35Q96D05 121 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 TMEM56Q96MV1 263 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 LANCL2Q9NS86 450 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 HS3ST3A1Q9Y663 406 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 TMEM56-RWDD3S4R434 201 aa12.89□□□□□ -0.35
UBAP1-202ENST00000359544 TP53I11O14683 189 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 CTSEP14091 401 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 OR10J1P30954 320 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 ACSF3Q4G176 576 aaPredicted RBP12.88□□□□□ -0.35
UBAP1-202ENST00000359544 ACTL10Q5JWF8 245 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 CYP2G1PQ6ZSU1 146 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 MRGPRGQ86SM5 289 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 MBD3L1Q8WWY6 194 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 PIGTQ969N2 578 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 WWTR1Q9GZV5 400 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 MAGT1Q9H0U3 335 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 OPN3Q9H1Y3 402 aaPredicted RBP12.88□□□□□ -0.35
UBAP1-202ENST00000359544 ZNF665Q9H7R5 613 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 UBE2J1Q9Y385 318 aaPredicted RBP12.88□□□□□ -0.35
UBAP1-202ENST00000359544 FREM2Q5SZK8 3169 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 SPTY2D1-AS1A0A0U1RR47 76 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 ANKUB1A6NFN9 424 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 H7BYZ3 331 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 ZNF205O95201 554 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 TNFP01375 233 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 ANOS1P23352 680 aa12.88□□□□□ -0.35
UBAP1-202ENST00000359544 HHEXQ03014 270 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms