RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ARF6P62330 175 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 RPS27AP62979 156 aaKnown RBP4.36□□□□□ -1.71
ATXN3-202ENST00000359366 CXADRP78310 365 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 TLE4Q04727 773 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 FABP9Q0Z7S8 132 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 ARFRP1Q13795 201 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 GUSBP1Q15486 140 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 OR8B8Q15620 311 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 GABRA6Q16445 453 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 C2orf68Q2NKX9 166 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 IGFL3Q6UXB1 125 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 DNM1P46Q6ZS02 220 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 COLCA1Q6ZS62 124 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 C22orf34Q6ZV56 151 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 FBXL14Q8N1E6 418 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 C17orf78Q8N4C9 275 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 OR51F2Q8NH61 342 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 KCNG3Q8TAE7 436 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 MRPS24Q96EL2 167 aaKnown RBP4.36□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF75AQ96N20 296 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 MED28Q9H204 178 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 SLC25A32Q9H2D1 315 aa4.36□□□□□ -1.71
ATXN3-202ENST00000359366 UTP20O75691 2785 aaKnown RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 FLNCQ14315 2725 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 UBE2QL1A1L167 161 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 CD300LBA8K4G0 201 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 DISC1C4P0D8 188 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 H0YL77 283 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 SYNGR1O43759 233 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 WDR1O75083 606 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 MPC2O95563 127 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 TFF1P04155 84 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 CSF1P09603 554 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 HIST1H1DP16402 221 aaKnown RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF14P17017 642 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 BCL3P20749 454 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 BMP5P22003 454 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 MPV17P39210 176 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 PNLIPRP3Q17RR3 467 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF674Q2M3X9 581 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 TMEM42Q69YG0 159 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ETFRF1Q6IPR1 90 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ATRAIDQ6UW56 229 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 Q6ZT83 130 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 TMEM200AQ86VY9 491 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 BPIFB2Q8N4F0 458 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF611Q8N823 705 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 WDR31Q8NA23 367 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 APOBEC3DQ96AK3 386 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 MRGPRFQ96AM1 343 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 TSNAXQ99598 290 aaKnown RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 PECRQ9BY49 303 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 PARD6GQ9BYG4 376 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 PRDM13Q9H4Q3 707 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 CA10Q9NS85 328 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF701Q9NV72 531 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 PRR13Q9NZ81 148 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 SVEP1Q4LDE5 3571 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 IGSF10Q6WRI0 2623 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 HIVEP3Q5T1R4 2406 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 HRNRQ86YZ3 2850 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ANKHD1Q8IWZ3 2542 aaKnown RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF732B4DXR9 585 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 EEF1E1-BLOC1S5C9J1V9 151 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 AP4M1O00189 453 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ATXN7O15265 892 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 XRCC2O43543 280 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 RHBDL1O75783 438 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 NDUFB6O95139 128 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 CSTBP04080 98 aaKnown RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF735P0CB33 412 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 CDC34P49427 236 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF83P51522 516 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 MRPS10P82664 201 aaKnown RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 MALLQ13021 153 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 PDZK1IP1Q13113 114 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 CNN3Q15417 329 aaKnown RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 LGALSLQ3ZCW2 172 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 NSUN5P2Q63ZY6 315 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF474Q6S9Z5 364 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-202ENST00000359366 FAM180AQ6UWF9 173 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 FAM219AQ8IW50 185 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 HSD17B11Q8NBQ5 300 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 CCDC54Q8NEL0 328 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 OR10AD1Q8NGE0 317 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 CD300LFQ8TDQ1 290 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 SPSB4Q96A44 273 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 PTX4Q96A99 478 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 SULT4A1Q9BR01 284 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 TMEM208Q9BTX3 173 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 TMPRSS13Q9BYE2 586 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 CST11Q9H112 138 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 FN3KRPQ9HA64 309 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 ASF1BQ9NVP2 202 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 PLEKHJ1Q9NW61 149 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 PROCRQ9UNN8 238 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 SLC7A11Q9UPY5 501 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 FBXO7Q9Y3I1 522 aa4.35□□□□□ -1.71
ATXN3-202ENST00000359366 A0A0A6YYH2 397 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 MEX3AA1L020 520 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms