RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 UQCC1Q9NVA1 299 aa12.23□□□□□ -0.45
NIPAL3-203ENST00000358028 FBXL17Q9UF56 701 aa12.23□□□□□ -0.45
NIPAL3-203ENST00000358028 NDRG3Q9UGV2 375 aa12.23□□□□□ -0.45
NIPAL3-203ENST00000358028 AMDHD2Q9Y303 409 aa12.23□□□□□ -0.45
NIPAL3-203ENST00000358028 FREM1Q5H8C1 2179 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 ATP6V1G2-DDX39BF2Z307 99 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 OR7C1O76099 320 aaPredicted RBP12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 NGFP01138 241 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 ADCYAP1P18509 176 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 DUSP1P28562 367 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 GPM6AP51674 278 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 HERV-K104P61576 105 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 IL13RA2Q14627 380 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 RNFT1Q5M7Z0 435 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM180AQ6UWF9 173 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 RHOFQ9HBH0 211 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 SLC2A9Q9NRM0 540 aa12.22□□□□□ -0.45
NIPAL3-203ENST00000358028 ZNF407Q9C0G0 2248 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 BORCS7-ASMTA0A0B4J1R7 106 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 SLC22A20A6NK97 555 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 GPR31O00270 319 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 GPR137BO60478 399 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 MED6O75586 246 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 APLNRP35414 380 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 HAAOP46952 286 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 F2RL1P55085 397 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 TMEM33P57088 247 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 FXYD4P59646 89 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 FGF12P61328 243 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 FLI1Q01543 452 aaPredicted RBP12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 HIKESHIQ53FT3 197 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 OR2A2Q6IF42 318 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 BTNL8Q6UX41 500 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 Q6ZPA2 131 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 FOXRED2Q8IWF2 684 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 TMED3Q9Y3Q3 217 aa12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 LSM5Q9Y4Y9 91 aaKnown RBP12.21□□□□□ -0.45
NIPAL3-203ENST00000358028 USP9XQ93008 2570 aaPredicted RBP12.21□□□□□ -0.46
NIPAL3-203ENST00000358028 ZNF732B4DXR9 585 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 TSPAN9O75954 239 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 WISP2O76076 250 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 ZNF205O95201 554 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 IL18BPO95998 194 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 MBPP02686 304 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 LPAR6P43657 344 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 P2RY1P47900 373 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 FBXW9Q5XUX1 488 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 ZNF324BQ6AW86 544 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 DHRS7BQ6IAN0 325 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 COMMD1Q8N668 190 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 NANOS1Q8WY41 292 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 BCL2L2Q92843 193 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 MSI2Q96DH6 328 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 NRIP2Q9BQI9 281 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 ZDHHC11Q9H8X9 412 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 GP6Q9HCN6 339 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 PRELID1Q9Y255 219 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 ZNF175Q9Y473 711 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 ESPL1Q14674 2120 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 DNAJC13O75165 2243 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 CD300LBA8K4G0 201 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 SIGLEC5O15389 551 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 GLAP06280 429 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 SEC11BP0C7V7 166 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 WNT5AP41221 380 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 UQCRFS1P47985 274 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 ARHGDIBP52566 201 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 RND3P61587 244 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 GUCA2BQ16661 112 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 HAGHLQ6PII5 290 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 LDLRAD3Q86YD5 345 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 MKXQ8IYA7 352 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 OR5A2Q8NGI9 324 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 LYPD6BQ8NI32 183 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 HIST1H2AAQ96QV6 131 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 HRH4Q9H3N8 390 aa12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 FAM212BQ9NTI7 297 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 RCC2Q9P258 522 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-203ENST00000358028 DOPEY2Q9Y3R5 2298 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 GTF3C1Q12789 2109 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 RNASEK-C17orf49H0YIS7 233 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 TRAPPC2LH3BP13 241 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 ST8SIA3O43173 380 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 FBXO24O75426 580 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 CD5P06127 495 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 RCC1P18754 421 aaPredicted RBP12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 TDGF1P3P51864 188 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 AKR1C2P52895 323 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 SRSF3P84103 164 aaKnown RBP12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 AKR1C1Q04828 323 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 MPV17LQ2QL34 196 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 MDP1Q86V88 176 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 FAM219AQ8IW50 185 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 GLYATL2Q8WU03 294 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 TLNRD1Q9H1K6 362 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 MTCH1Q9NZJ7 389 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 HIVEP3Q5T1R4 2406 aa12.19□□□□□ -0.46
NIPAL3-203ENST00000358028 ANKRD30BLA7E2S9 258 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 DIRAS3O95661 229 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms