RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 C10orf35Q96D05 121 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 PTP4A3O75365 173 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 A0A0B4J2E0 115 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 A0A1B0GX12 115 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 ASPDHA6ND91 283 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 DHHO43323 396 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 IGLV3-25P01717 112 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 DMKNQ6E0U4 476 aaPredicted RBP10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 PWWP2BQ6NUJ5 590 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 C6orf201Q7Z4U5 140 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 PDFQ9HBH1 243 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 FAM181BA6NEQ2 426 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 FABP2P12104 132 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 SUCLG1P53597 346 aaKnown RBP10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 ECSCRQ19T08 205 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 MRAP2Q96G30 205 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 LINC00615Q96LM1 132 aaPredicted RBP10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 TBX15Q96SF7 602 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 MTCH2Q9Y6C9 303 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 RALGAPA1Q6GYQ0 2036 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 CD1AP06126 327 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 GABRG3Q99928 467 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 RREB1Q92766 1687 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 MYOFQ9NZM1 2061 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 GEMIN2O14893 280 aaKnown RBP10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 C19orf54Q5BKX5 351 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 ABHD3Q8WU67 409 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 ISOC2Q96AB3 205 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 RSG1Q9BU20 258 aa10.19□□□□□ -0.78
SPTBN1-202ENST00000356805 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 GPR3P46089 330 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 UBALD2Q8IYN6 164 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 ELOVL1Q9BW60 279 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 MRPL13Q9BYD1 178 aaKnown RBP10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 TMIGD3P0DMS9 266 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 PPP1CCP36873 323 aaKnown RBP10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 SERF2P84101 59 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 TMEM211Q6ICI0 200 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 NEU3Q9UQ49 428 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 ZNF256Q9Y2P7 627 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 DIRC3C9JPN6 131 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 CCR5P51681 352 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 ISXQ2M1V0 245 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 KIRREL2Q6UWL6 708 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 LIAT1Q6ZQX7 453 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 NUDT16L1Q9BRJ7 211 aaKnown RBP10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 RAB33BQ9H082 229 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 CXCL16Q9H2A7 254 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 GHITMQ9H3K2 345 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 CNTD2Q9H8S5 307 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 C2CD4DB7Z1M9 353 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 RER1O15258 196 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 COL8A1P27658 744 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 FUT7Q11130 342 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 GAGE10A6NGK3 116 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 OGG1O15527 345 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 ZNF324O75467 553 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 CYB5R3P00387 301 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 RIGQ13278 110 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 C11orf94C9JXX5 98 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 OR2A5Q96R48 311 aa10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 COL16A1Q07092 1604 aaPredicted RBP10.18□□□□□ -0.78
SPTBN1-202ENST00000356805 TRAV17A0A0B4J275 112 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 DHRS7CA6NNS2 312 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 RPS4XP62701 263 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 BHLHA15Q7RTS1 189 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 PARD6GQ9BYG4 376 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 OR2J1Q9GZK6 312 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 AMDHD2Q9Y303 409 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 ASB1Q9Y576 335 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 LINC01565O15544 149 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 UQCRFS1P47985 274 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 SPINK14Q6IE38 97 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 PAM16Q9Y3D7 125 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 IGKV3D-11A0A0A0MRZ8 115 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 IGHV3-21A0A0B4J1V1 117 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 IGKV3-11P04433 115 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 FMODQ06828 376 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 ZNF79Q15937 498 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 HES3Q5TGS1 186 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 PRNTQ86SH4 94 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 MSRB3Q8IXL7 192 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 ABHD14BQ96IU4 210 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 MMP25Q9NPA2 562 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 ANXA10Q9UJ72 324 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 SSC5DA1L4H1 1573 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 CORTO00230 105 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 MT-CO3P00414 261 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 NMUP48645 174 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 MVDP53602 400 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 NUBPLQ8TB37 319 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 ZNF502Q8TBZ5 544 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 RAB1CQ92928 201 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 CXXC4Q9H2H0 198 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 TRBV23-1A0A0A0MS06 115 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 DHRS3O75911 302 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 MMP9P14780 707 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 FAM53BQ14153 422 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 PSG5Q15238 335 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 IZUMO4Q1ZYL8 232 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms