RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 RTN4IP1Q8WWV3 396 aaPredicted RBP13.61□□□□□ -0.23
RTN3-205ENST00000356000 ATP5SQ99766 215 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 MMP25Q9NPA2 562 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 THAP10Q9P2Z0 257 aaPredicted RBP13.61□□□□□ -0.23
RTN3-205ENST00000356000 GOLGA4Q13439 2230 aaKnown RBP13.61□□□□□ -0.23
RTN3-205ENST00000356000 MPDZO75970 2070 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 IGKV1D-8A0A087WSZ0 117 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 LOC101059948A0A1B0GTJ6 334 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 TMEM250H0YL14 139 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 TOX4O94842 621 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 ONECUT2O95948 504 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 LGALS7P47929 136 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 LHX2P50458 406 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 OR4A47Q6IF82 309 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 WDR73Q6P4I2 378 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 MEX3BQ6ZN04 569 aaKnown RBP13.61□□□□□ -0.23
RTN3-205ENST00000356000 OR52L2PQ8NGH6 319 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 CPT1CQ8TCG5 803 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 UHRF2Q96PU4 802 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 VDAC3Q9Y277 283 aa13.61□□□□□ -0.23
RTN3-205ENST00000356000 A0A1W2PP11 408 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 ZNF878C9JN71 531 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 K7ESM1 405 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 CST7O76096 145 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 SLC11A1P49279 550 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 KRTDAPP60985 99 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 MRPS34P82930 218 aaKnown RBP13.6□□□□□ -0.23
RTN3-205ENST00000356000 ZIC4Q8N9L1 334 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 CADM4Q8NFZ8 388 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 SAMD10Q9BYL1 202 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 ZNF586Q9NXT0 402 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 GAGE12BA1L429 117 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 NKX2-2O95096 273 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 GYPAP02724 150 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 NKX2-1P43699 371 aaPredicted RBP13.6□□□□□ -0.23
RTN3-205ENST00000356000 GABRA2P47869 451 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 PPP1CBP62140 327 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 EXT1Q16394 746 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 TXNDC8Q6A555 127 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 FAM89BQ8N5H3 189 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 OR5D14Q8NGL3 314 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 LRRC3BQ96PB8 259 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 ATG2AQ2TAZ0 1938 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 B4DGG1 531 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 C22orf46C9J442 243 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 GALR2O43603 387 aaPredicted RBP13.6□□□□□ -0.23
RTN3-205ENST00000356000 WNT2P09544 360 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 SLC6A8P48029 635 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 ARG2P78540 354 aa13.6□□□□□ -0.23
RTN3-205ENST00000356000 MEF2BQ02080 365 aaPredicted RBP13.6□□□□□ -0.23
RTN3-205ENST00000356000 PHF7Q9BWX1 381 aaPredicted RBP13.6□□□□□ -0.23
RTN3-205ENST00000356000 SCN3AQ9NY46 2000 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 SH2D1BO14796 132 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 ZNF737O75373 536 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 GNRHRP30968 328 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 CLLU1OSQ5K130 101 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 FAM71F2Q6NXP2 309 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 MUC15Q8N387 334 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 SMRP1Q8NCR6 262 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 MRPL13Q9BYD1 178 aaKnown RBP13.59□□□□□ -0.23
RTN3-205ENST00000356000 OR10A2Q9H208 303 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 PLA2G3Q9NZ20 509 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 ALPK2Q86TB3 2170 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 FOXI3A8MTJ6 420 aaPredicted RBP13.59□□□□□ -0.23
RTN3-205ENST00000356000 VENTXO95231 258 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 HLA-HP01893 362 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 CRISP2P16562 243 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 LTBRP36941 435 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 FOXL1Q12952 345 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 PLPPR5Q32ZL2 321 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 ABCA11PQ4W5N1 156 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 TSPO2Q5TGU0 170 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 SIGLECL1Q8N7X8 197 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 OR4F17Q8NGA8 305 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 SPACA5Q96QH8 159 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 OR4F4Q96R69 305 aa13.59□□□□□ -0.23
RTN3-205ENST00000356000 RBM24Q9BX46 236 aaKnown RBP13.59□□□□□ -0.23
RTN3-205ENST00000356000 IGLV1-36A0A0B4J1U3 117 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 TAX1BP3O14907 124 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 RAMP3O60896 148 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 NPIPB7O75200 414 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 IGKV1D-16P01601 117 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 GPX1P07203 203 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 CD99P14209 185 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 GLB1P16278 677 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 OR3A4PP47883 348 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 PAX2Q02962 417 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 ZNF141Q15928 474 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 ZNF468Q5VIY5 522 aaPredicted RBP13.58□□□□□ -0.24
RTN3-205ENST00000356000 RAET1LQ5VY80 246 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 UBALD2Q8IYN6 164 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 LIME1Q9H400 295 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 VSIRQ9H7M9 311 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 ZDHHC11Q9H8X9 412 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 SSSCA1O60232 199 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 SAP30O75446 220 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 TNFSF15O95150 251 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 ZNF728P0DKX0 622 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 SRPXP78539 464 aa13.58□□□□□ -0.24
RTN3-205ENST00000356000 TCF23Q7RTU1 214 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms