RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TRAT1Q6PIZ9 186 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 ZNF767PQ75MW2 155 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 DMRTC2Q8IXT2 367 aaPredicted RBP14.47□□□□□ -0.09
VPS13B-201ENST00000355155 GCSAMQ8N6F7 178 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 SYT3Q9BQG1 590 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 CHIAQ9BZP6 476 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 ZNF737O75373 536 aa14.46□□□□□ -0.09
VPS13B-201ENST00000355155 VAMP1P23763 118 aa14.46□□□□□ -0.09
VPS13B-201ENST00000355155 ZNF81P51508 661 aa14.46□□□□□ -0.09
VPS13B-201ENST00000355155 GMFBP60983 142 aa14.46□□□□□ -0.09
VPS13B-201ENST00000355155 HERV-K104P61576 105 aa14.46□□□□□ -0.09
VPS13B-201ENST00000355155 EFNB3Q15768 340 aa14.46□□□□□ -0.09
VPS13B-201ENST00000355155 LRRC29Q8WV35 223 aa14.46□□□□□ -0.09
VPS13B-201ENST00000355155 OR2V2Q96R30 315 aa14.46□□□□□ -0.09
VPS13B-201ENST00000355155 SHARPINQ9H0F6 387 aa14.46□□□□□ -0.09
VPS13B-201ENST00000355155 SHISA9B4DS77 424 aa14.46□□□□□ -0.1
VPS13B-201ENST00000355155 SIRPB1O00241 398 aa14.46□□□□□ -0.1
VPS13B-201ENST00000355155 WNT9BO14905 357 aa14.46□□□□□ -0.1
VPS13B-201ENST00000355155 PSPNO60542 156 aa14.46□□□□□ -0.1
VPS13B-201ENST00000355155 NFYAP23511 347 aaPredicted RBP14.46□□□□□ -0.1
VPS13B-201ENST00000355155 ZNF345Q14585 488 aa14.46□□□□□ -0.1
VPS13B-201ENST00000355155 ESCO2Q56NI9 601 aa14.46□□□□□ -0.1
VPS13B-201ENST00000355155 GSG1LQ6UXU4 331 aa14.46□□□□□ -0.1
VPS13B-201ENST00000355155 GRPEL2Q8TAA5 225 aa14.46□□□□□ -0.1
VPS13B-201ENST00000355155 LURAP1Q96LR2 239 aa14.46□□□□□ -0.1
VPS13B-201ENST00000355155 SLC2A9Q9NRM0 540 aa14.46□□□□□ -0.1
VPS13B-201ENST00000355155 TANC2Q9HCD6 1990 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 GNRHRP30968 328 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 PIGPP57054 158 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 NEK7Q8TDX7 302 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 C18orf12Q96KH6 178 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 DUSP13Q9UII6 198 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 HEXAP06865 529 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 EGR1P18146 543 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 CXCL2P19875 107 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 TESK1Q15569 626 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 TEX36Q5VZQ5 186 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 WFDC8Q8IUA0 241 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 ESRP2Q9H6T0 727 aaKnown RBP14.45□□□□□ -0.1
VPS13B-201ENST00000355155 OR2W1Q9Y3N9 320 aa14.45□□□□□ -0.1
VPS13B-201ENST00000355155 ABCD4O14678 606 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 TNFSF4P23510 183 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 C11orf87Q6NUJ2 197 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 CD177Q8N6Q3 437 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 BVESQ8NE79 360 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 MSI2Q96DH6 328 aaKnown RBP14.44□□□□□ -0.1
VPS13B-201ENST00000355155 COQ2Q96H96 371 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 SNX22Q96L94 193 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 KCNIP3Q9Y2W7 256 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 DUXBA0A1W2PPF3 345 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 A6NLC8 198 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 GPR31O00270 319 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 PSG2P11465 335 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 SRPXP78539 464 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 FAM209AQ5JX71 171 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 ITLN1Q8WWA0 313 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 RTN4IP1Q8WWV3 396 aaPredicted RBP14.44□□□□□ -0.1
VPS13B-201ENST00000355155 C2orf50Q96LR7 162 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 SH3BGRL2Q9UJC5 107 aa14.44□□□□□ -0.1
VPS13B-201ENST00000355155 MGAQ8IWI9 3026 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 TEX13DA0A0J9YY54 714 aaPredicted RBP14.43□□□□□ -0.1
VPS13B-201ENST00000355155 OOEPA6NGQ2 149 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 CCL21O00585 134 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 PI3P19957 117 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 SERPINF1P36955 418 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 CASTOR1Q8WTX7 329 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 IL22RA2Q969J5 263 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 AKR1E2Q96JD6 320 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 GCM1Q9NP62 436 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 ACACAQ13085 2346 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 IGKV1D-17A0A075B6S4 117 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 PIGBOS1A0A0B4J2F0 54 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 RCC1P18754 421 aaPredicted RBP14.43□□□□□ -0.1
VPS13B-201ENST00000355155 LOXP28300 417 aaPredicted RBP14.43□□□□□ -0.1
VPS13B-201ENST00000355155 PRDX2P32119 198 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 LIAT1Q6ZQX7 453 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 SDSLQ96GA7 329 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 TMEM56Q96MV1 263 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 TNFSF18Q9UNG2 199 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 TMEM56-RWDD3S4R434 201 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 ZGRF1Q86YA3 2104 aa14.43□□□□□ -0.1
VPS13B-201ENST00000355155 VSTM5A8MXK1 200 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 MPPED1O15442 326 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 RBMXP38159 391 aaKnown RBP14.42□□□□□ -0.1
VPS13B-201ENST00000355155 TNFAIP6P98066 277 aaPredicted RBP14.42□□□□□ -0.1
VPS13B-201ENST00000355155 COL10A1Q03692 680 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 SLC9A3R2Q15599 337 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 SPRNQ5BIV9 151 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 C6orf183Q5T699 404 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 LRRC46Q96FV0 321 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 TMEM204Q9BSN7 226 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 RNF7Q9UBF6 113 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 C17orf100A8MU93 164 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 C3orf80F5H4A9 247 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 TFF3Q07654 80 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 ABCA11PQ4W5N1 156 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 STUMQ69YW2 141 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 OR10J5Q8NHC4 309 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 ANGPTL6Q8NI99 470 aa14.42□□□□□ -0.1
VPS13B-201ENST00000355155 KIRREL1Q96J84 757 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms