RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 IL22RA2Q969J5 263 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 USB1Q9BQ65 265 aaKnown RBP18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 RTL8AQ9BWD3 113 aa18.99■□□□□ 0.63
NKX2-1-201ENST00000354822 TRAV24A0A0B4J272 114 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 CLEC18AA5D8T8 446 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 LILRA1O75019 489 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 CD5P06127 495 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 SPP1P10451 314 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 TNFSF10P50591 281 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 Q8IYB0 196 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 CLEC18CQ8NCF0 446 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 TMEM231Q9H6L2 316 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 ZDHHC8Q9ULC8 765 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 IGKV1-6A0A0C4DH72 117 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 HS3ST1O14792 307 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 DANCRP0C864 163 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 DVL1P1P54792 670 aaPredicted RBP18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 WFDC1Q9HC57 220 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 DLL3Q9NYJ7 618 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 TREM2Q9NZC2 230 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 LUZP4Q9P127 313 aa18.98■□□□□ 0.63
NKX2-1-201ENST00000354822 IGKV1D-13A0A0B4J2D9 117 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 DEGS1O15121 323 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 IGKV1-13P0DP09 117 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 VDAC1P21796 283 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 MDH2P40926 338 aaKnown RBP18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 PCSK4Q6UW60 755 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 OR2C3Q8N628 320 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 OR10J5Q8NHC4 309 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 BSCL2Q96G97 398 aaPredicted RBP18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 KIRREL1Q96J84 757 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 ZNF488Q96MN9 340 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 OR51B6Q9H340 312 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 ARID1AO14497 2285 aa18.97■□□□□ 0.63
NKX2-1-201ENST00000354822 CDRT15L2A8MXV6 281 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 ZNF14P17017 642 aaPredicted RBP18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 UBE2NP61088 152 aaKnown RBP18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 FAM76BQ5HYJ3 339 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 OR5D13Q8NGL4 314 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 RDH5Q92781 318 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 BOD1Q96IK1 185 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 C11orf1Q9H5F2 150 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 CCL28Q9NRJ3 127 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 POLDIP2Q9Y2S7 368 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 OR2W1Q9Y3N9 320 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 SPAARA0A1B0GVQ0 90 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 LRP5LA4QPB2 252 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 H0Y980 276 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 HSD17B6O14756 317 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 MMP9P14780 707 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 HLA-DRB3P79483 266 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 NHLH2Q02577 135 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 CLEC9AQ6UXN8 241 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 SLC25A31Q9H0C2 315 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 FAM96BQ9Y3D0 163 aa18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 STRAPQ9Y3F4 350 aaKnown RBP18.96■□□□□ 0.63
NKX2-1-201ENST00000354822 H2AFB1P0C5Y9 115 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 NOVA1P51513 510 aaKnown RBP18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 EWSR1Q01844 656 aaKnown RBP eCLIP18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 DHRS7BQ6IAN0 325 aaPredicted RBP18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 C20orf204Q6ZNR8 217 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 C5orf24Q7Z6I8 188 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 CABLES2Q9BTV7 478 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 PLEKHF2Q9H8W4 249 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 CDH20Q9HBT6 801 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 TSPAN15O95858 294 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 ZNF44P15621 663 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 CTRB1P17538 263 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 PPP1CBP62140 327 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 ZNF324BQ6AW86 544 aaPredicted RBP18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 CTRB2Q6GPI1 263 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 MOB1BQ7L9L4 216 aa18.95■□□□□ 0.62
NKX2-1-201ENST00000354822 PGLYRP1O75594 196 aaPredicted RBP18.94■□□□□ 0.62
NKX2-1-201ENST00000354822 IGHG3P01860 377 aa18.94■□□□□ 0.62
NKX2-1-201ENST00000354822 HOXB1P14653 301 aaPredicted RBP18.94■□□□□ 0.62
NKX2-1-201ENST00000354822 ZNF266Q14584 549 aa18.94■□□□□ 0.62
NKX2-1-201ENST00000354822 NMSQ5H8A3 153 aa18.94■□□□□ 0.62
NKX2-1-201ENST00000354822 SPATA46Q5T0L3 261 aa18.94■□□□□ 0.62
NKX2-1-201ENST00000354822 Q6P435 159 aa18.94■□□□□ 0.62
NKX2-1-201ENST00000354822 H1FOOQ8IZA3 346 aaPredicted RBP18.94■□□□□ 0.62
NKX2-1-201ENST00000354822 NPIPB11E5RHQ5 1161 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 ADAM20O43506 726 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 SMPD2O60906 423 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 RHBDL1O75783 438 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 WNT2P09544 360 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 SFTA3P0C7M3 94 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 VAMP2P63027 116 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 SHEQ5VZ18 495 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 TMPRSS7Q7RTY8 843 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 C17orf78Q8N4C9 275 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 LILRB1Q8NHL6 650 aaPredicted RBP18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 SNIP1Q8TAD8 396 aaKnown RBP18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 NDRG3Q9UGV2 375 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 RAC2P15153 192 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 F2RP25116 425 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 CD80P33681 288 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 UCP2P55851 309 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 ID3Q02535 119 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 HMGN3Q15651 99 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 INO80CQ6PI98 192 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms