RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PSMF1Q92530 271 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 RDH5Q92781 318 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 ZNF391Q9UJN7 358 aa15.49■□□□□ 0.07
PTP4A3-202ENST00000349124 LOC400499M0QZD8 3231 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 PRSS44E7EML9 344 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 CYB561P49447 251 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 RAB5CP51148 216 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 RND3P61587 244 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 RNF212Q495C1 297 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 UBALD1Q8TB05 177 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 PRDM14Q9GZV8 571 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 PLEKHF2Q9H8W4 249 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 LIPGQ9Y5X9 500 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 ARGFXA6NJG6 315 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 RPS23P62266 143 aaKnown RBP15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 ZXDAP98168 799 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 SUMF2Q8NBJ7 301 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 PBDC1Q9BVG4 233 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 MMP24Q9Y5R2 645 aa15.48■□□□□ 0.07
PTP4A3-202ENST00000349124 ASPMQ8IZT6 3477 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 RBFOX3A6NFN3 312 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 PLA2G5P39877 138 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 VAMP2P63027 116 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 NMSQ5H8A3 153 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 P4HA3Q7Z4N8 544 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 VASH2Q86V25 355 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 OR1J1Q8NGS3 322 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 LYRM2Q9NU23 88 aaPredicted RBP15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 PCSK5Q92824 1860 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 LINC00587B1AMM8 73 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 H0YL77 283 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 UBE2CO00762 179 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 TXNL1O43396 289 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 FGF12P61328 243 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 C3AR1Q16581 482 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 OR51H1Q8NH63 302 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 CT55Q8WUE5 264 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 CPNE4Q96A23 557 aaPredicted RBP15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 TAAR9Q96RI9 348 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 TUBA4BQ9H853 241 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 LRFN1Q9P244 771 aa15.47■□□□□ 0.07
PTP4A3-202ENST00000349124 FAM166BA8MTA8 275 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 OR8U8P0C7N1 319 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 PAX9P55771 341 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 ID3Q02535 119 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 ZNF343Q6P1L6 599 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 MRPL21Q7Z2W9 205 aaKnown RBP15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 WDR5BQ86VZ2 330 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 NCOR1O75376 2440 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 IGHV3-64DA0A0J9YX35 117 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 PGLYRP1O75594 196 aaPredicted RBP15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 JMJD7P0C870 316 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 NCMAPQ5T1S8 102 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 Q8NFD4 153 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 TAAR3PQ9P1P4 343 aa15.46■□□□□ 0.07
PTP4A3-202ENST00000349124 PITX3O75364 302 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 OR2C1O95371 312 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 ZNF266Q14584 549 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 PCSK4Q6UW60 755 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 THOC3Q96J01 351 aaKnown RBP15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 NIT2Q9NQR4 276 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 FAM86C1Q9NVL1 165 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 PLA2G3Q9NZ20 509 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 ATPIF1Q9UII2 106 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 URGCP-MRPS24S4R325 110 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 H3BQ15 152 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 CEACAM21Q3KPI0 293 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 Q6ZRM9 215 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 IL22RA1Q8N6P7 574 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 TRAPPC2LH3BP13 241 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 TUSC2O75896 110 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 TRA2AQ13595 282 aaKnown RBP eCLIP15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 ZDHHC23Q8IYP9 409 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 PRR18Q8N4B5 295 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 IL1F10Q8WWZ1 152 aa15.45■□□□□ 0.06
PTP4A3-202ENST00000349124 WRBO00258 174 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 IGHV2-5P01817 119 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 VDAC1P21796 283 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 UCP1P25874 307 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 RAB1AP62820 205 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 TCEAL6Q6IPX3 200 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 FAM185AQ8N0U4 392 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 CYB561D1Q8N8Q1 229 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 TCEAL3Q969E4 200 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 RAB39BQ96DA2 213 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 ERRFI1Q9UJM3 462 aaPredicted RBP15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 RHBDL1O75783 438 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 TMEM267Q0VDI3 215 aaPredicted RBP15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 RHEBQ15382 184 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 ZNF295-AS1Q8N0V1 137 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 RNF115Q9Y4L5 304 aa15.44■□□□□ 0.06
PTP4A3-202ENST00000349124 SRP19P09132 144 aaKnown RBP15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 LHX2P50458 406 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 SRPXP78539 464 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 SPATA46Q5T0L3 261 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 DCAF12Q5T6F0 453 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 MKXQ8IYA7 352 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 MRPL30Q8TCC3 161 aaKnown RBP15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 GPR146Q96CH1 333 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 SLC25A31Q9H0C2 315 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms