RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 CCL28Q9NRJ3 127 aa12.57□□□□□ -0.4
SMTN-202ENST00000347557 TP53TG5Q9Y2B4 290 aa12.57□□□□□ -0.4
SMTN-202ENST00000347557 TMED3Q9Y3Q3 217 aa12.57□□□□□ -0.4
SMTN-202ENST00000347557 TRAV39A0A0B4J263 110 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 H0YL77 283 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 HS3ST1O14792 307 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 PPIHO43447 177 aaKnown RBP12.56□□□□□ -0.4
SMTN-202ENST00000347557 YIF1AO95070 293 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 PDZD11Q5EBL8 140 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 IMMP1LQ96LU5 166 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 ZNF488Q96MN9 340 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 IGHV2-5P01817 119 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 HLA-HP01893 362 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 RAB4AP20338 218 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 NDUFA6P56556 154 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 UBE2KP61086 200 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 TLE1Q04724 770 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 EXT1Q16394 746 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 ZNF818PQ6ZRF7 136 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 SAP25Q8TEE9 199 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 TMEM171Q8WVE6 324 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 RDH5Q92781 318 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 DECR2Q9NUI1 292 aa12.56□□□□□ -0.4
SMTN-202ENST00000347557 STRAPQ9Y3F4 350 aaKnown RBP12.56□□□□□ -0.4
SMTN-202ENST00000347557 KNTC1P50748 2209 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 ZNF816-ZNF321PA0A0X1KG74 233 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 RBFOX3A6NFN3 312 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 GJE1A6NN92 205 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 KLF7O75840 302 aaPredicted RBP12.55□□□□□ -0.4
SMTN-202ENST00000347557 CST2P09228 141 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 ZNF16P17020 682 aaPredicted RBP12.55□□□□□ -0.4
SMTN-202ENST00000347557 KIAA0141Q14154 515 aaPredicted RBP12.55□□□□□ -0.4
SMTN-202ENST00000347557 ZNF674Q2M3X9 581 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 LYPD6BQ8NI32 183 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 HPSE2Q8WWQ2 592 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 SCRT1Q9BWW7 348 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 CRIM1Q9NZV1 1036 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 DIDO1Q9BTC0 2240 aaKnown RBP12.55□□□□□ -0.4
SMTN-202ENST00000347557 IGKV1D-13A0A0B4J2D9 117 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 hCG_38984A0A1B0GV85 526 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 C5orf49A4QMS7 147 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 TRDCB7Z8K6 153 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 IGKV1-13P0DP09 117 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 DDTP30046 118 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 FOLR3P41439 243 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 CLDN15P56746 228 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 NUTF2P61970 127 aaKnown RBP12.55□□□□□ -0.4
SMTN-202ENST00000347557 MYPOPQ86VE0 399 aaPredicted RBP12.55□□□□□ -0.4
SMTN-202ENST00000347557 C17orf78Q8N4C9 275 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 TMEM252Q8N6L7 170 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 CPEB3Q8NE35 698 aaKnown RBP12.55□□□□□ -0.4
SMTN-202ENST00000347557 TOLLIPQ9H0E2 274 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 ZDBF2Q9HCK1 2354 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 HSPA12AO43301 675 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 CHST1O43916 411 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 ZNF266Q14584 549 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 AKR1C8PQ5T2L2 129 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 VASH2Q86V25 355 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 COMMD1Q8N668 190 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 AGBL5Q8NDL9 886 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 S100PBPQ96BU1 408 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 GPR61Q9BZJ8 451 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 TMEM222Q9H0R3 208 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 ARV1Q9H2C2 271 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 CALHM2Q9HA72 323 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 GLRX2Q9NS18 164 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 GFOD1Q9NXC2 390 aa12.55□□□□□ -0.4
SMTN-202ENST00000347557 CEP192Q8TEP8 1941 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 WDFY4Q6ZS81 3184 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 OR6C6A6NF89 314 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 H3BQ15 152 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 AGAP20933 346 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 RND3P61587 244 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 RPS23P62266 143 aaKnown RBP12.54□□□□□ -0.4
SMTN-202ENST00000347557 FOXL2NBQ6ZUU3 175 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 TDHQ8IZJ6 230 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 OR4D5Q8NGN0 318 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 GPR35Q9HC97 309 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 DNAJC13O75165 2243 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 FRYQ5TBA9 3013 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 A0A087X0M5 115 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 A0A1B0GX30 115 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 K7N7A8 449 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 TMEM267Q0VDI3 215 aaPredicted RBP12.54□□□□□ -0.4
SMTN-202ENST00000347557 CPT1CQ8TCG5 803 aa12.54□□□□□ -0.4
SMTN-202ENST00000347557 RBM7Q9Y580 266 aaKnown RBP12.54□□□□□ -0.4
SMTN-202ENST00000347557 K7ESF4 209 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 RAB5CP51148 216 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 MRPL21Q7Z2W9 205 aaKnown RBP12.53□□□□□ -0.4
SMTN-202ENST00000347557 THNSL2Q86YJ6 484 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 CYB561D1Q8N8Q1 229 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 RAB39BQ96DA2 213 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 PLEKHF2Q9H8W4 249 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 ZNF716A6NP11 495 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 PROB1E7EW31 1015 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 IFNA17P01571 189 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 FOXG1P55316 489 aaPredicted RBP12.53□□□□□ -0.4
SMTN-202ENST00000347557 MLF1P58340 268 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 PRDX4Q13162 271 aa12.53□□□□□ -0.4
SMTN-202ENST00000347557 EIF3IQ13347 325 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms