RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 HMX3A6NHT5 357 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 RAB27BO00194 218 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 NRASP01111 189 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 TCRBP04435 133 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 GSTT2P0CG29 244 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 GNG3P63215 75 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 FAM189A2Q15884 450 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 CLVS2Q5SYC1 327 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 ZBTB37Q5TC79 503 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 ZNF788Q6ZQV5 615 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 CD177Q8N6Q3 437 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 LY6G5BQ8NDX9 201 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 OR10Z1Q8NGY1 313 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 ST8SIA4Q92187 359 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 MAB21L2Q9Y586 359 aa13.24□□□□□ -0.29
RAB5C-201ENST00000346213 MT-ND4P03905 459 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 CHRM2P08172 466 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 CSF1P09603 554 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 PSG2P11465 335 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 MUC1P15941 1255 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-201ENST00000346213 PRKACBP22694 351 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 PTGFRP43088 359 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 CD300CQ08708 224 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 MZT1Q08AG7 82 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 CNN3Q15417 329 aaKnown RBP13.23□□□□□ -0.29
RAB5C-201ENST00000346213 TATDN3Q17R31 274 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 MICBQ29980 383 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 MOGAT2Q3SYC2 334 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 ZNF260Q3ZCT1 412 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 ATPAF1Q5TC12 328 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-201ENST00000346213 Q8N7P7 452 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 OR5A2Q8NGI9 324 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 LPAR5Q9H1C0 372 aa13.23□□□□□ -0.29
RAB5C-201ENST00000346213 RPUSD1Q9UJJ7 312 aaKnown RBP13.23□□□□□ -0.29
RAB5C-201ENST00000346213 ENSAO43768 121 aaKnown RBP13.22□□□□□ -0.29
RAB5C-201ENST00000346213 CPT2P23786 658 aa13.22□□□□□ -0.29
RAB5C-201ENST00000346213 RAG2P55895 527 aa13.22□□□□□ -0.29
RAB5C-201ENST00000346213 GUCA2AQ02747 115 aa13.22□□□□□ -0.29
RAB5C-201ENST00000346213 BTNL3Q6UXE8 466 aa13.22□□□□□ -0.29
RAB5C-201ENST00000346213 FTMTQ8N4E7 242 aa13.22□□□□□ -0.29
RAB5C-201ENST00000346213 ZNRF1Q8ND25 227 aa13.22□□□□□ -0.29
RAB5C-201ENST00000346213 CPNE2Q96FN4 548 aaPredicted RBP13.22□□□□□ -0.29
RAB5C-201ENST00000346213 PCGF1Q9BSM1 259 aa13.22□□□□□ -0.29
RAB5C-201ENST00000346213 IL36RNQ9UBH0 155 aa13.22□□□□□ -0.29
RAB5C-201ENST00000346213 DNAJC9-AS1A6NH13 148 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 OR2AT4A6NND4 320 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 DHFRP00374 187 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 LPLP06858 475 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 MELTFP08582 738 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 PGA5P0DJD9 388 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 PPIAL4GP0DN37 164 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 FAUP35544 74 aaKnown RBP13.21□□□□□ -0.29
RAB5C-201ENST00000346213 HAAOP46952 286 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 ARF6P62330 175 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 UBA52P62987 128 aaKnown RBP13.21□□□□□ -0.29
RAB5C-201ENST00000346213 C9orf139Q6ZV77 190 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 PDZD9Q8IXQ8 264 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 POC1AQ8NBT0 407 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 ZNF107Q9UII5 783 aaPredicted RBP13.21□□□□□ -0.29
RAB5C-201ENST00000346213 ALG5Q9Y673 324 aa13.21□□□□□ -0.29
RAB5C-201ENST00000346213 CENPVL3A0A0U1RRI6 287 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 OR5B21A6NL26 309 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 SIGLEC5O15389 551 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 CCNKO75909 580 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 MPIG6BO95866 241 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 MPZP25189 248 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 VEGFCP49767 419 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 NPY4RP50391 375 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 CCR6P51684 374 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 ARPC4P59998 168 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 ACTBP60709 375 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 ERVK11-1P61568 191 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 ACTG1P63261 375 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 DEFB112Q30KQ8 113 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 ACP7Q6ZNF0 438 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 LHFPL2Q6ZUX7 228 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 BPIFB2Q8N4F0 458 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 TMEM104Q8NE00 496 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 OR10R2Q8NGX6 335 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 ZNF418Q8TF45 676 aaPredicted RBP13.21□□□□□ -0.3
RAB5C-201ENST00000346213 TNFAIP8L1Q8WVP5 186 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 NRIP2Q9BQI9 281 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 URM1Q9BTM9 101 aaKnown RBP13.21□□□□□ -0.3
RAB5C-201ENST00000346213 TMEM59Q9BXS4 323 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 CST11Q9H112 138 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 HES4Q9HCC6 221 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 DNAJB11Q9UBS4 358 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 ING4Q9UNL4 249 aa13.21□□□□□ -0.3
RAB5C-201ENST00000346213 A0A0A6YYJ9 748 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 J3QT63 122 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 NDUFA2O43678 99 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 H2AFB2P0C5Z0 115 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 GLRA1P23415 457 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 EIF2B2P49770 351 aaKnown RBP13.2□□□□□ -0.3
RAB5C-201ENST00000346213 MTCP1P56278 107 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 ZP1P60852 638 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 KLRD1Q13241 179 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 KCNJ8Q15842 424 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 CDNFQ49AH0 187 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 PNKDQ8N490 385 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms