RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 WDR74Q6RFH5 385 aaPredicted RBP13.61□□□□□ -0.23
SRPK1-201ENST00000346162 ZDHHC23Q8IYP9 409 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 SLC22A18ASQ8N1D0 253 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 CLEC18CQ8NCF0 446 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 RASL10BQ96S79 203 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 SLC25A22Q9H936 323 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 ASCL3Q9NQ33 180 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 SPINT2O43291 252 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 FOLR2P14207 255 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 FUT6P51993 359 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 TMEM267Q0VDI3 215 aaPredicted RBP13.61□□□□□ -0.23
SRPK1-201ENST00000346162 SOX7Q9BT81 388 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 IL9P15248 144 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 DYNLT3P51808 116 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 STARD6P59095 220 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 CLEC1BQ9P126 229 aa13.61□□□□□ -0.23
SRPK1-201ENST00000346162 TMEM210A6NLX4 147 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 GLIPR1P48060 266 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 INSM1Q01101 510 aaPredicted RBP13.6□□□□□ -0.23
SRPK1-201ENST00000346162 PLGLAQ15195 96 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 SLC36A1Q7Z2H8 476 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 LSRQ86X29 649 aaPredicted RBP13.6□□□□□ -0.23
SRPK1-201ENST00000346162 ZADH2Q8N4Q0 377 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 APCDD1LQ8NCL9 501 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 PGLYRP3Q96LB9 341 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 DHRS3O75911 302 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 CTSDP07339 412 aaPredicted RBP13.6□□□□□ -0.23
SRPK1-201ENST00000346162 SLC25A6P12236 298 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 FHITP49789 147 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 TNFSF10P50591 281 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 RAC1P63000 192 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 WDR73Q6P4I2 378 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 RAB40CQ96S21 281 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 WIPI2Q9Y4P8 454 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 CASP8AP2Q9UKL3 1982 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 ADAM20O43506 726 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 HSPB1P04792 205 aaKnown RBP13.6□□□□□ -0.23
SRPK1-201ENST00000346162 EWSR1Q01844 656 aaKnown RBP eCLIP13.6□□□□□ -0.23
SRPK1-201ENST00000346162 HIST3H3Q16695 136 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 C9orf40Q8IXQ3 194 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 FAM234AQ9H0X4 552 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 SLC26A1Q9H2B4 701 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
SRPK1-201ENST00000346162 CHEK1O14757 476 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 RND3P61587 244 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 MRGPRGQ86SM5 289 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 ASB10Q8WXI3 467 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 GDF15Q99988 308 aa13.6□□□□□ -0.23
SRPK1-201ENST00000346162 RNF222A6NCQ9 220 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 LIPT2A6NK58 231 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 NDUFS8O00217 210 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 RPS23P62266 143 aaKnown RBP13.59□□□□□ -0.23
SRPK1-201ENST00000346162 TSPO2Q5TGU0 170 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 H2BFWTQ7Z2G1 175 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 OR6X1Q8NH79 312 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 TPPP3Q9BW30 176 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 FSCN3Q9NQT6 498 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 A0A1B0GV72 72 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 A0A1W2PPE3 182 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 MPPED1O15442 326 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 FAM157BP0CG42 384 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 PLP1P60201 277 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 IL24Q13007 206 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 MYPOPQ86VE0 399 aaPredicted RBP13.59□□□□□ -0.23
SRPK1-201ENST00000346162 ZPLD1Q8TCW7 415 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 LIN7CQ9NUP9 197 aaKnown RBP13.59□□□□□ -0.23
SRPK1-201ENST00000346162 YTHDF2Q9Y5A9 579 aaKnown RBP13.59□□□□□ -0.23
SRPK1-201ENST00000346162 OR5R1Q8NH85 324 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 ANGPTL4Q9BY76 406 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 GAL3ST2Q9H3Q3 398 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 MARCH11A6NNE9 402 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 C4orf47A7E2U8 309 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 SIRPB1O00241 398 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 C19orf35Q6ZS72 473 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 CRIPAKQ8N1N5 446 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 OR10G8Q8NGN5 311 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 CHRDL1Q9BU40 450 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 OR2J1Q9GZK6 312 aa13.59□□□□□ -0.23
SRPK1-201ENST00000346162 CACNA1EQ15878 2313 aa13.58□□□□□ -0.23
SRPK1-201ENST00000346162 ZNF732B4DXR9 585 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 SCGB2A1O75556 95 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 ZIC2O95409 532 aaPredicted RBP13.58□□□□□ -0.24
SRPK1-201ENST00000346162 IGHV2-70P01814 119 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 BGLAPP02818 100 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 ZNF32P17041 273 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 CRYBA2P53672 197 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 NANOS3P60323 173 aaKnown RBP13.58□□□□□ -0.24
SRPK1-201ENST00000346162 APOBEC3DQ96AK3 386 aaPredicted RBP13.58□□□□□ -0.24
SRPK1-201ENST00000346162 SARAFQ96BY9 339 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 AURKAIP1Q9NWT8 199 aaPredicted RBP13.58□□□□□ -0.24
SRPK1-201ENST00000346162 OR1A1Q9P1Q5 309 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 A6NNC1 897 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 M0R2Z0 102 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 AGAP20933 346 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 FUT3P21217 361 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 RBPJQ06330 500 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 ZNF774Q6NX45 483 aa13.58□□□□□ -0.24
SRPK1-201ENST00000346162 ADGRG7Q96K78 797 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms