RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 C17orf78Q8N4C9 275 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 ARRDC1Q8N5I2 433 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 C12orf45Q8N5I9 185 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-202ENST00000345734 RNASE11Q8TAA1 199 aaKnown RBP7.85□□□□□ -1.15
ATG4A-202ENST00000345734 KLF14Q8TD94 323 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-202ENST00000345734 OR51I2Q9H344 312 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 OSGIN2Q9Y236 505 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 MAB21L2Q9Y586 359 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 SLC25A15Q9Y619 301 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 OR5H14A6NHG9 310 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 PRSS47A8MTI9 375 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 A8MXK9 166 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 H0YL77 283 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 DNASE2O00115 360 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-202ENST00000345734 OR2A4O95047 310 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 GIPP09681 153 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-202ENST00000345734 PI3P19957 117 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 CALCRP30988 508 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 CEACAM8P31997 349 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF573Q86YE8 665 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 NANPQ8TBE9 248 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 S100PBPQ96BU1 408 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 MARS2Q96GW9 593 aaKnown RBP7.84□□□□□ -1.15
ATG4A-202ENST00000345734 LINC00052Q96N35 136 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 OR2A7Q96R45 310 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 C5orf66Q9H5L9 145 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF442Q9H7R0 627 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 PLCE1Q9P212 2302 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 CHD3Q12873 2000 aaKnown RBP7.84□□□□□ -1.15
ATG4A-202ENST00000345734 KALRNO60229 2985 aa7.84□□□□□ -1.15
ATG4A-202ENST00000345734 IGHV2OR16-5A0A0B4J2B6 119 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 C9orf170A2RU37 121 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 IQCF6A8MYZ5 107 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 SELEP16581 610 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 DTYMKP23919 212 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 PTAFRP25105 342 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 CD40P25942 277 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 CD34P28906 385 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 TAS2R60P59551 318 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 SSX2Q16385 188 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 LIN54Q6MZP7 749 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 UNQ6494/PRO21346Q6UXR6 183 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 LYG2Q86SG7 212 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 DOLPP1Q86YN1 238 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 SFT2D1Q8WV19 159 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 TMEM230Q96A57 120 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 MICU1Q9BPX6 476 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 ADAT1Q9BUB4 502 aaKnown RBP7.84□□□□□ -1.16
ATG4A-202ENST00000345734 LIME1Q9H400 295 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 SDHAF2Q9NX18 166 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 ANXA10Q9UJ72 324 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 GPR132Q9UNW8 380 aa7.84□□□□□ -1.16
ATG4A-202ENST00000345734 NOP16Q9Y3C1 178 aaKnown RBP7.84□□□□□ -1.16
ATG4A-202ENST00000345734 NCOR2Q9Y618 2525 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 ATRXP46100 2492 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 HSPB6O14558 160 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 C4BPBP20851 252 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 GLRA1P23415 457 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 IL13RA1P78552 427 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 LGALSLQ3ZCW2 172 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-202ENST00000345734 AARDQ4LEZ3 155 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 NHLRC3Q5JS37 347 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 LY6G6FQ5SQ64 297 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 C11orf88Q6PI97 169 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 C5orf24Q7Z6I8 188 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 TMEM17Q86X19 198 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 SCCPDHQ8NBX0 429 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 CASTOR1Q8WTX7 329 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 C16orf92Q96LL3 132 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 RTBDNQ9BSG5 229 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-202ENST00000345734 RTL8AQ9BWD3 113 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 SFXN3Q9BWM7 321 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 HEXA-AS1Q9H8Q6 139 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 OBP2BQ9NPH6 170 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 OPN4Q9UHM6 478 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 SH3BGRL2Q9UJC5 107 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 AMDHD2Q9Y303 409 aa7.83□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A10PA6NDY2 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A18PA6NE21 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A16PA6NEW6 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A20PA6NIJ5 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A8PA6NJQ4 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A7PA6NKC0 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 CEACAM18A8MTB9 384 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A22PA8MWA6 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A12PA8MX19 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A5PA8MXJ8 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 NUDT19A8MXV4 375 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A23PA8MXZ1 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 F5H5P2 479 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 J3QT63 122 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 CCSO14618 274 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 MLNRO43193 412 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A15PP0C7V4 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A13PP0C7W8 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A14PP0C7W9 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM90A24PP0C7X0 464 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 BMP5P22003 454 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FABP6P51161 128 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 ZNF83P51522 516 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms