RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SHISA9B4DS77 424 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 TPD52L2O43399 206 aaKnown RBP11.4□□□□□ -0.58
CDC42-202ENST00000344548 SFT2D2O95562 160 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 PPYP01298 95 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 LMO1P25800 156 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 CHRNB4P30926 498 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 AESQ08117 197 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 RBM39Q14498 530 aaKnown RBP11.4□□□□□ -0.58
CDC42-202ENST00000344548 SPIN3Q5JUX0 258 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 PRR18Q8N4B5 295 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 PLPPR2Q96GM1 343 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 KIRREL1Q96J84 757 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 TRAF4Q9BUZ4 470 aaPredicted RBP11.4□□□□□ -0.58
CDC42-202ENST00000344548 SHARPINQ9H0F6 387 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 DSCAMO60469 2012 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 USP24Q9UPU5 2620 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 TRBV6-6A0A0A6YYG2 114 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 SRRM5B3KS81 715 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 SSTR2P30874 369 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 UQCRFS1P47985 274 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 COL10A1Q03692 680 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 SP6Q3SY56 376 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 PHLDA2Q53GA4 152 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 GAPTQ8N292 157 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 OR5M8Q8NGP6 311 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 LILRB4Q8NHJ6 448 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 MOB3AQ96BX8 217 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 COQ2Q96H96 371 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 RANBP3Q9H6Z4 567 aaPredicted RBP11.39□□□□□ -0.59
CDC42-202ENST00000344548 GCM1Q9NP62 436 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 OR1A1Q9P1Q5 309 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 DCHS2Q6V1P9 2916 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 TRAV14DV4A0A0A6YYC5 116 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.39□□□□□ -0.59
CDC42-202ENST00000344548 E7EQL1 145 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 ZNF728P0DKX0 622 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 PSG2P11465 335 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 PLA2G5P39877 138 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 PIGPP57054 158 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 RPS23P62266 143 aaKnown RBP11.39□□□□□ -0.59
CDC42-202ENST00000344548 CCL8P80075 99 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 SURF2Q15527 256 aaPredicted RBP11.39□□□□□ -0.59
CDC42-202ENST00000344548 SRSF7Q16629 238 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDC42-202ENST00000344548 NCMAPQ5T1S8 102 aa11.39□□□□□ -0.59
CDC42-202ENST00000344548 PARP12Q9H0J9 701 aaKnown RBP11.39□□□□□ -0.59
CDC42-202ENST00000344548 A0A1B0GW55 424 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 LHBP01229 141 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 GLAP06280 429 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 CTSDP07339 412 aaPredicted RBP11.38□□□□□ -0.59
CDC42-202ENST00000344548 DUX4L2P0CJ85 424 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 DUX4L3P0CJ86 424 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 DUX4L4P0CJ87 422 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 DUX4L5P0CJ88 424 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 DUX4L6P0CJ89 424 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 DUX4L7P0CJ90 424 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 GNRHRP30968 328 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 OR3A1P47881 315 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 RAP2BP61225 183 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 TNFAIP6P98066 277 aaPredicted RBP11.38□□□□□ -0.59
CDC42-202ENST00000344548 DUX4L9Q6RFH8 374 aaPredicted RBP11.38□□□□□ -0.59
CDC42-202ENST00000344548 IL1F10Q8WWZ1 152 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 PHB2Q99623 299 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 DCTN5Q9BTE1 182 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 DUX4Q9UBX2 424 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 HRNRQ86YZ3 2850 aaPredicted RBP11.38□□□□□ -0.59
CDC42-202ENST00000344548 FAM25EA8MYX2 175 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 CYB5R3P00387 301 aaPredicted RBP11.38□□□□□ -0.59
CDC42-202ENST00000344548 SELLP14151 372 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 TAS2R31P59538 309 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 HLA-DRB3P79483 266 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 SORDQ00796 357 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 FBXL19-AS1Q494R0 122 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 C1QTNF12Q5T7M4 302 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 KIF25Q9UIL4 384 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 TRAPPC2LQ9UL33 140 aa11.38□□□□□ -0.59
CDC42-202ENST00000344548 C14orf166Q9Y224 244 aaKnown RBP11.38□□□□□ -0.59
CDC42-202ENST00000344548 CACNA1BQ00975 2339 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 ERVH48-1M5A8F1 160 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 TUSC2O75896 110 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 HLA-GP17693 338 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 CXCL2P19875 107 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 PRDX2P32119 198 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 CD80P33681 288 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 SERPINF1P36955 418 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 CFHR2P36980 270 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 GLIPR1P48060 266 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 KCNJ3P48549 501 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 SHEQ5VZ18 495 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 PRR7Q8TB68 274 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 RNASE6Q93091 150 aaKnown RBP11.37□□□□□ -0.59
CDC42-202ENST00000344548 SCGB3A2Q96PL1 93 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 RIMS4Q9H426 269 aaPredicted RBP11.37□□□□□ -0.59
CDC42-202ENST00000344548 SLC2A9Q9NRM0 540 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 MBNL3Q9NUK0 354 aaKnown RBP11.37□□□□□ -0.59
CDC42-202ENST00000344548 RASL12Q9NYN1 266 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 COQ3Q9NZJ6 369 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 RALYQ9UKM9 306 aaKnown RBP11.37□□□□□ -0.59
CDC42-202ENST00000344548 DYSFO75923 2080 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 ARFGEF3Q5TH69 2177 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms