RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 AKAP12Q02952 1782 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 GFRA2O00451 464 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 FAM219AQ8IW50 185 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 DMRTC2Q8IXT2 367 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 CXorf36Q9H7Y0 433 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 C1RLQ9NZP8 487 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 POLDIP2Q9Y2S7 368 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 LY96Q9Y6Y9 160 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 TRAV8-4A0A0B4J246 113 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 C1QCP02747 245 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 SNHG12Q9BXW3 62 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 IER3IP1Q9Y5U9 82 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 ERHP84090 104 aaKnown RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 DUSP13Q9UII6 198 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 A0A1B0GTH9 108 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 PLXDC2Q6UX71 529 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 SCCPDHQ8NBX0 429 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 OR10S1Q8NGN2 331 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 ZIC5Q96T25 663 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 SIGLEC8Q9NYZ4 499 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 CLN8Q9UBY8 286 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 TBC1D29Q9UFV1 150 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 SIVA1O15304 175 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 PITX3O75364 302 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 GJB5O95377 273 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 IL6RP08887 468 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-202ENST00000344113 DHRS2Q13268 280 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 DLX4Q92988 240 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-202ENST00000344113 CLEC5AQ9NY25 188 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 LOC107984156A0A0G2JMH3 177 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 GRXCR1A8MXD5 290 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 IL3RAP26951 378 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 DAPP51397 102 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 ARL17AQ8IVW1 177 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 LRRC25Q8N386 305 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-202ENST00000344113 DHHO43323 396 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 DRD1P21728 446 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 LRRC75BQ2VPJ9 315 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 SGMS2Q8NHU3 365 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 FUT9Q9Y231 359 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 INSL6Q9Y581 213 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 MPIG6BO95866 241 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 TAS1R1Q7RTX1 841 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 ST6GALNAC3Q8NDV1 305 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 ERGIC1Q969X5 290 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 GALMQ96C23 342 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 LMO7Q8WWI1 1683 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 IFNL4K9M1U5 179 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 FBXL22Q6P050 247 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 Q8WTZ3 238 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 IL17FQ96PD4 163 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 BCL2L10Q9HD36 194 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 MMP25Q9NPA2 562 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 MSRAQ9UJ68 235 aa3.34□□□□□ -1.88
SYNE2-202ENST00000344113 WNK3Q9BYP7 1800 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 IDSB3KWA1 339 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 H3BQ85 93 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 NKX2-8O15522 239 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 AMY1AP04745 511 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SRD5A2P31213 254 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 ABHD17BQ5VST6 288 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF860A6NHJ4 632 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 B3GAT3O94766 335 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CFDP00746 253 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 IRF2P14316 349 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 DLX6P56179 175 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 TEX43Q6ZNM6 134 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM170AQ8WVE7 144 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 NMNAT3Q96T66 252 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 RTP3Q9BQQ7 232 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 IMUPQ9GZP8 106 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 BARX1Q9HBU1 254 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 TFCP2L1Q9NZI6 479 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 KLF12Q9Y4X4 402 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 RIMBP3CA6NJZ7 1639 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 RIMBP3BA6NNM3 1639 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 NUP205Q92621 2012 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 NTN1O95631 604 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 ACYP1P07311 99 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 NMUP48645 174 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 KLRB1Q12918 225 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CDK5R1Q15078 307 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 DUSP5Q16690 384 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 GAGE13Q4V321 117 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 PRRT3Q5FWE3 981 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 FCRL6Q6DN72 434 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CPEB2Q7Z5Q1 589 aaKnown RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF414Q96IQ9 312 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 IL36GQ9NZH8 169 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 ST6GALNAC2Q9UJ37 374 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 A0A1B0GU03 582 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CTSDP07339 412 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 UCP1P25874 307 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 Q0VG73 95 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 MOGAT3Q86VF5 341 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 MUCL1Q96DR8 90 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 VSIG4Q9Y279 399 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 KIF20BQ96Q89 1820 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 KCNE1BA0A087WTH5 132 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms