RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 OR2M7Q8NG81 312 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 LRRC29Q8WV35 223 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 A0A1W2PPH5 198 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 AQP7O14520 342 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 PHOX2AO14813 284 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 CD8AP01732 235 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 MPGP29372 298 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 SULT1A2P50226 295 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 FAM3AP98173 230 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 RIPPLY2Q5TAB7 128 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 OR10AD1Q8NGE0 317 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 TMEM37Q8WXS4 190 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 BORCS7Q96B45 105 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 MYOZ1Q9NP98 299 aaPredicted RBP6.25□□□□□ -1.41
VCAN-202ENST00000342785 A0A1W2PPE2 198 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 CD200P41217 278 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 FGF8P55075 233 aaPredicted RBP6.25□□□□□ -1.41
VCAN-202ENST00000342785 PCOLCEQ15113 449 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 ALKBH6Q3KRA9 238 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 ETV3LQ6ZN32 361 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 C1QL2Q7Z5L3 287 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 MRGPRFQ96AM1 343 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 SLC25A22Q9H936 323 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 RCC2Q9P258 522 aaKnown RBP6.25□□□□□ -1.41
VCAN-202ENST00000342785 FZR1Q9UM11 496 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 IGHV1-45A0A0A0MS14 117 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 CA11O75493 328 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 IGHV3-13P01766 116 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 IGHV3-7P01780 117 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 IGHMP01871 453 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 MELTFP08582 738 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 SULT1A1P50225 295 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 ADAMTS17Q8TE56 1095 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 WNT2BQ93097 391 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 FAM210BQ96KR6 192 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 IFT22Q9H7X7 185 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 PKDREJQ9NTG1 2253 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 A0A1B0GTI1 187 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 hCG_1809904A0A1W2PP81 198 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 A0A1W2PR64 198 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 A0A1W2PRV1 198 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 ZNF320A2RRD8 509 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 F2RP25116 425 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 IL3RAP26951 378 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 ZNF83P51522 516 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 TMEM50BP56557 158 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 STARD6P59095 220 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 SPEM2Q0P670 501 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 TMEM241Q24JQ0 296 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 GFI1Q99684 422 aa6.25□□□□□ -1.41
VCAN-202ENST00000342785 SIP14410 1827 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 TRGV10A0A0A0MS01 117 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 MEOX2P50222 304 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 FBXW9Q5XUX1 488 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 SLC16A13Q7RTY0 426 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 CPEB3Q8NE35 698 aaKnown RBP6.24□□□□□ -1.41
VCAN-202ENST00000342785 OR10D4PQ8NGN7 298 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 Q96M66 194 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 AQP10Q96PS8 301 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 C21orf140B9A014 251 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 SOX15O60248 233 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 MBPP02686 304 aaPredicted RBP6.24□□□□□ -1.41
VCAN-202ENST00000342785 OR5G3P0C626 314 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 SPP1P10451 314 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 PMELP40967 661 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 NPBWR1P48145 328 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 TAS2R45P59539 299 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 RUNX1Q01196 453 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 RSPO4Q2I0M5 234 aaPredicted RBP6.24□□□□□ -1.41
VCAN-202ENST00000342785 SNAI3Q3KNW1 292 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 PLAC9Q5JTB6 97 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 FFAR4Q5NUL3 377 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 ZNF66Q6ZN08 573 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 MESP1Q9BRJ9 268 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 RSRP1Q9BUV0 290 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 TMPRSS5Q9H3S3 457 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 HNF1AP20823 631 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 SUB1P53999 127 aaKnown RBP eCLIP6.24□□□□□ -1.41
VCAN-202ENST00000342785 SOX8P57073 446 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 RTL8BQ17RB0 113 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 FNDC7Q5VTL7 733 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 RYDENQ9NUL5 291 aaKnown RBP6.24□□□□□ -1.41
VCAN-202ENST00000342785 ATP23Q9Y6H3 246 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 ZNF98A6NK75 572 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 ACTL6AO96019 429 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 RAB5AP20339 215 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 ATP5SQ99766 215 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 CACFD1Q9UGQ2 172 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 HSF4Q9ULV5 492 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 MKRN2OSH3BPM6 223 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 CT45A6P0DMU7 189 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 CT45A5P0DMU8 189 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 CT45A7P0DMV0 189 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 SPINK9Q5DT21 86 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 CT45A1Q5HYN5 189 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 LYG1Q8N1E2 194 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 ZNF439Q8NDP4 499 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 OR10G4Q8NGN3 311 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 OR10G9Q8NGN4 311 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 OR10G7Q8NGN6 311 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms